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Fixes for numpy 2.0 #1090

Merged
merged 2 commits into from
Jan 9, 2024
Merged

Fixes for numpy 2.0 #1090

merged 2 commits into from
Jan 9, 2024

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kinnala
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@kinnala kinnala commented Jan 9, 2024

Makes sure that test suite runs (without the parts that depend on meshio and matplotlib which both are currently broken with numpy==2) with numpy==2 nightly build.

  • Changed all occurences of np.is1d to np.isin
  • Made sure that inputs to np.isin are of type np.int64 and not np.uint64

Note that meshio does not currently work with numpy==2 because of removed functionality. Because meshio is an optional dependency of scikit-fem, I don't currently plan to enforce numpy<2 here. Even though meshio is inactive, fix to meshio is quite easy (replacing some np.string_ with np.bytes_) so perhaps it will happen.

It is still possible that some code breaks because we do not guard against stuff like np.uint64 going into np.isin and other functions used within scikit-fem that will be, for some reason, more stricter of their type in numpy==2. It is not entirely clear to me what change in numpy==2 causes this, and it might even be a bug because I am testing against a nightly build.

@kinnala kinnala merged commit 58f9a88 into master Jan 9, 2024
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@kinnala kinnala deleted the fix-numpy-2 branch January 9, 2024 06:56
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