Merge branch 'cornerstonejs:main' into main

CHANGELOG.md

@@ -3,6 +3,90 @@
 All notable changes to this project will be documented in this file.
 See [Conventional Commits](https://conventionalcommits.org) for commit guidelines.
 
+## [1.77.2](https://github.com/cornerstonejs/cornerstone3D/compare/v1.77.1...v1.77.2) (2024-05-29)
+
+### Bug Fixes
+
+- **seg:** Handle useSharedArrayBuffer configuration properly in volume creation ([#1290](https://github.com/cornerstonejs/cornerstone3D/issues/1290)) ([561bd4b](https://github.com/cornerstonejs/cornerstone3D/commit/561bd4bcd556d968b8e4f9ec48061aaeb434e045))
+
+## [1.77.1](https://github.com/cornerstonejs/cornerstone3D/compare/v1.77.0...v1.77.1) (2024-05-29)
+
+### Bug Fixes
+
+- **contour:** set default for renderFill to true ([#1289](https://github.com/cornerstonejs/cornerstone3D/issues/1289)) ([ca86dbb](https://github.com/cornerstonejs/cornerstone3D/commit/ca86dbbbf4efd8dd29c14a5d8e50e8adc703b265))
+
+# [1.77.0](https://github.com/cornerstonejs/cornerstone3D/compare/v1.76.1...v1.77.0) (2024-05-28)
+
+### Features
+
+- **nifti:** update nifti-reader-js to 0.6.8 ([#1286](https://github.com/cornerstonejs/cornerstone3D/issues/1286)) ([e3704cd](https://github.com/cornerstonejs/cornerstone3D/commit/e3704cd1889b19549acde27ba97b642c27dd87e5))
+
+## [1.76.1](https://github.com/cornerstonejs/cornerstone3D/compare/v1.76.0...v1.76.1) (2024-05-28)
+
+**Note:** Version bump only for package root
+
+# [1.76.0](https://github.com/cornerstonejs/cornerstone3D/compare/v1.75.2...v1.76.0) (2024-05-28)
+
+### Features
+
+- Add render to canvas for mpr/volume viewports ([#1215](https://github.com/cornerstonejs/cornerstone3D/issues/1215)) ([e400277](https://github.com/cornerstonejs/cornerstone3D/commit/e4002774bcedeb2334d008cb3ab3e294ff1c088b))
+
+## [1.75.2](https://github.com/cornerstonejs/cornerstone3D/compare/v1.75.1...v1.75.2) (2024-05-28)
+
+### Bug Fixes
+
+- **core:** correctly set the orientation of the volume ([#1287](https://github.com/cornerstonejs/cornerstone3D/issues/1287)) ([9637dfb](https://github.com/cornerstonejs/cornerstone3D/commit/9637dfbb64eeb39d92c979d5922604079847b1e9))
+
+## [1.75.1](https://github.com/cornerstonejs/cornerstone3D/compare/v1.75.0...v1.75.1) (2024-05-28)
+
+### Bug Fixes
+
+- **color:** Fix RGB inconsistencies ([#829](https://github.com/cornerstonejs/cornerstone3D/issues/829)) ([2fc22bc](https://github.com/cornerstonejs/cornerstone3D/commit/2fc22bcd1c0cac22b88e964699d55c51bd83283e))
+
+# [1.75.0](https://github.com/cornerstonejs/cornerstone3D/compare/v1.74.8...v1.75.0) (2024-05-28)
+
+### Features
+
+- **nifti:** NIFTI data type enhancement ([#1219](https://github.com/cornerstonejs/cornerstone3D/issues/1219)) ([03a2335](https://github.com/cornerstonejs/cornerstone3D/commit/03a233525a67ac9bc6bc9a6d144334e67756f11f))
+
+## [1.74.8](https://github.com/cornerstonejs/cornerstone3D/compare/v1.74.7...v1.74.8) (2024-05-24)
+
+### Bug Fixes
+
+- **measurements:** include volumeid and other useful properties in annotation metadata ([#1281](https://github.com/cornerstonejs/cornerstone3D/issues/1281)) ([8f4ff3e](https://github.com/cornerstonejs/cornerstone3D/commit/8f4ff3e3b836ca4d5817f90ac7349232635cdac1))
+
+## [1.74.7](https://github.com/cornerstonejs/cornerstone3D/compare/v1.74.6...v1.74.7) (2024-05-23)
+
+### Bug Fixes
+
+- **crosshairs:** configurable viewportIndicators ([#1268](https://github.com/cornerstonejs/cornerstone3D/issues/1268)) ([268f1b1](https://github.com/cornerstonejs/cornerstone3D/commit/268f1b1d6bd99781d707c57b7afc764d7f26c824))
+
+## [1.74.6](https://github.com/cornerstonejs/cornerstone3D/compare/v1.74.5...v1.74.6) (2024-05-23)
+
+### Bug Fixes
+
+- **metaData:** transfer syntax retrieval in metaDataProvider ([#1273](https://github.com/cornerstonejs/cornerstone3D/issues/1273)) ([a10b9f1](https://github.com/cornerstonejs/cornerstone3D/commit/a10b9f19926899804a4e7926a77839a6c156219c))
+
+## [1.74.5](https://github.com/cornerstonejs/cornerstone3D/compare/v1.74.4...v1.74.5) (2024-05-22)
+
+### Bug Fixes
+
+- **rt:** assign correct imageId for Stack ([#1269](https://github.com/cornerstonejs/cornerstone3D/issues/1269)) ([4845045](https://github.com/cornerstonejs/cornerstone3D/commit/48450453eca53ed7f54e2a0b8fe8ff1ce3b8d3e1))
+
+## [1.74.4](https://github.com/cornerstonejs/cornerstone3D/compare/v1.74.3...v1.74.4) (2024-05-21)
+
+### Bug Fixes
+
+- **rendering:** Allow memory sizes between 2gb and 4gb by using wasm allocation ([#1260](https://github.com/cornerstonejs/cornerstone3D/issues/1260)) ([a00952e](https://github.com/cornerstonejs/cornerstone3D/commit/a00952e0dc7d1563855dbe4b140d8c478c2b1788))
+
+## [1.74.3](https://github.com/cornerstonejs/cornerstone3D/compare/v1.74.2...v1.74.3) (2024-05-21)
+
+**Note:** Version bump only for package root
+
+## [1.74.2](https://github.com/cornerstonejs/cornerstone3D/compare/v1.74.1...v1.74.2) (2024-05-21)
+
+**Note:** Version bump only for package root
+
 ## [1.74.1](https://github.com/cornerstonejs/cornerstone3D/compare/v1.74.0...v1.74.1) (2024-05-17)
 
 ### Bug Fixes

commit.txt

@@ -1 +1 @@
-03a51a2f81f2126926c7bead455de58d5b364990
+561bd4bcd556d968b8e4f9ec48061aaeb434e045

common/reviews/api/core.api.md

@@ -62,7 +62,7 @@ type ActorSliceRange = {
 };
 
 // @public (undocumented)
-export function addImageSlicesToViewports(renderingEngine: IRenderingEngine, stackInputs: Array<IStackInput>, viewportIds: Array<string>, immediateRender?: boolean, suppressEvents?: boolean): Promise<void>;
+export function addImageSlicesToViewports(renderingEngine: IRenderingEngine, stackInputs: Array<IStackInput>, viewportIds: Array<string>): Promise<void>;
 
 // @public (undocumented)
 function addProvider(provider: (type: string, ...query: string[]) => any, priority?: number): void;
@@ -230,7 +230,7 @@ declare namespace cacheUtils {
 }
 
 // @public (undocumented)
-function calculateViewportsSpatialRegistration(viewport1: IStackViewport | IVolumeViewport, viewport2: IStackViewport | IVolumeViewport): void;
+function calculateViewportsSpatialRegistration(viewport1: StackViewport | IVolumeViewport, viewport2: StackViewport | IVolumeViewport): void;
 
 // @public (undocumented)
 enum CalibrationTypes {
@@ -376,7 +376,7 @@ enum ContourType {
 
 // @public (undocumented)
 function convertStackToVolumeViewport({ viewport, options, }: {
-    viewport: IStackViewport;
+    viewport: StackViewport;
     options: {
         volumeId: string;
         viewportId?: string;
@@ -991,7 +991,7 @@ function getBufferConfiguration(targetBufferType: PixelDataTypedArrayString, len
 function getClosestImageId(imageVolume: IImageVolume, worldPos: Point3, viewPlaneNormal: Point3): string;
 
 // @public (undocumented)
-function getClosestStackImageIndexForPoint(point: Point3, viewport: IStackViewport): number | null;
+function getClosestStackImageIndexForPoint(point: Point3, viewport: StackViewport): number | null;
 
 // @public (undocumented)
 function getColormap(name: any): any;
@@ -1088,7 +1088,7 @@ function getTransferFunctionNodes(transferFunction: any): any[];
 function getUnknownVolumeLoaderSchema(): string;
 
 // @public (undocumented)
-function getViewportImageCornersInWorld(viewport: IStackViewport | IVolumeViewport): Point3[];
+function getViewportImageCornersInWorld(viewport: StackViewport | IVolumeViewport): Point3[];
 
 // @public (undocumented)
 function getViewportImageIds(viewport: IViewport): string[];
@@ -1339,7 +1339,7 @@ interface IEnabledElement {
     // (undocumented)
     renderingEngineId: string;
     // (undocumented)
-    viewport: IStackViewport | IVolumeViewport;
+    viewport: StackViewport | IVolumeViewport;
     // (undocumented)
     viewportId: string;
 }
@@ -2005,7 +2005,7 @@ interface IRenderingEngine {
     // (undocumented)
     fillCanvasWithBackgroundColor(canvas: HTMLCanvasElement, backgroundColor: [number, number, number]): void;
     // (undocumented)
-    getStackViewports(): Array<IStackViewport>;
+    getStackViewports(): Array<StackViewport>;
     // (undocumented)
     getVideoViewports(): Array<IVideoViewport>;
     // (undocumented)
@@ -2079,79 +2079,6 @@ interface IStackInput {
     visibility?: boolean;
 }
 
-// @public (undocumented)
-interface IStackViewport extends IViewport {
-    // (undocumented)
-    addImages(stackInputs: Array<IStackInput>, immediateRender: boolean, suppressEvents: boolean): any;
-    // (undocumented)
-    calibrateSpacing(imageId: string): void;
-    // (undocumented)
-    canvasToWorld: (canvasPos: Point2) => Point3;
-    // (undocumented)
-    clearDefaultProperties(imageId?: string): void;
-    // (undocumented)
-    customRenderViewportToCanvas: () => {
-        canvas: HTMLCanvasElement;
-        element: HTMLDivElement;
-        viewportId: string;
-        renderingEngineId: string;
-    };
-    // (undocumented)
-    getCamera(): ICamera;
-    // (undocumented)
-    getCornerstoneImage: () => IImage;
-    // (undocumented)
-    getCurrentImageId: () => string;
-    // (undocumented)
-    getCurrentImageIdIndex: () => number;
-    // (undocumented)
-    getDefaultProperties: (imageId?: string) => StackViewportProperties;
-    // (undocumented)
-    getFrameOfReferenceUID: () => string;
-    // (undocumented)
-    getImageData(): IImageData | CPUIImageData;
-    // (undocumented)
-    getImageDataMetadata(image: IImage): any;
-    // (undocumented)
-    getImageIds: () => string[];
-    // (undocumented)
-    getProperties: () => StackViewportProperties;
-    // (undocumented)
-    getRenderer(): any;
-    // (undocumented)
-    hasImageId: (imageId: string) => boolean;
-    // (undocumented)
-    hasImageURI: (imageURI: string) => boolean;
-    // (undocumented)
-    modality: string;
-    // (undocumented)
-    resetCamera(resetPan?: boolean, resetZoom?: boolean): boolean;
-    // (undocumented)
-    resetProperties(): void;
-    // (undocumented)
-    resetToDefaultProperties(): void;
-    // (undocumented)
-    resize: () => void;
-    // (undocumented)
-    scaling: Scaling;
-    // (undocumented)
-    setCamera(cameraInterface: ICamera): void;
-    // (undocumented)
-    setDefaultProperties(ViewportProperties: StackViewportProperties, imageId?: string): void;
-    // (undocumented)
-    setImageIdIndex(imageIdIndex: number): Promise<string>;
-    // (undocumented)
-    setProperties({ voiRange, invert, interpolationType, rotation, colormap, }: StackViewportProperties, suppressEvents?: boolean): void;
-    // (undocumented)
-    setStack(imageIds: Array<string>, currentImageIdIndex?: number): Promise<string>;
-    // (undocumented)
-    stackActorReInitialized: boolean;
-    // (undocumented)
-    unsetColormap(): void;
-    // (undocumented)
-    worldToCanvas: (worldPos: Point3) => Point2;
-}
-
 // @public (undocumented)
 interface IStreamingImageVolume extends ImageVolume {
     // (undocumented)
@@ -2476,7 +2403,7 @@ function loadAndCacheImages(imageIds: Array<string>, options?: ImageLoaderOption
 function loadImage(imageId: string, options?: ImageLoaderOptions): Promise<IImage>;
 
 // @public (undocumented)
-function loadImageToCanvas(options: LoadImageOptions): Promise<string>;
+function loadImageToCanvas(options: LoadImageOptions): Promise<CanvasLoadPosition>;
 
 // @public (undocumented)
 function loadVolume(volumeId: string, options?: VolumeLoaderOptions): Promise<IImageVolume>;
@@ -2865,7 +2792,7 @@ export class RenderingEngine implements IRenderingEngine {
     // (undocumented)
     fillCanvasWithBackgroundColor(canvas: HTMLCanvasElement, backgroundColor: [number, number, number]): void;
     // (undocumented)
-    getStackViewports(): Array<IStackViewport>;
+    getStackViewports(): Array<StackViewport>;
     // (undocumented)
     getVideoViewports(): Array<IVideoViewport>;
     // (undocumented)
@@ -2897,10 +2824,12 @@ export class RenderingEngine implements IRenderingEngine {
 }
 
 // @public (undocumented)
-function renderToCanvasCPU(canvas: HTMLCanvasElement, image: IImage, modality?: string, _renderingEngineId?: string, _viewportOptions?: ViewportInputOptions): Promise<string>;
+function renderToCanvasCPU(canvas: HTMLCanvasElement, imageOrVolume: IImage | IVolume, modality?: string, _renderingEngineId?: string, _viewportOptions?: ViewportInputOptions): Promise<CanvasLoadPosition>;
 
 // @public (undocumented)
-function renderToCanvasGPU(canvas: HTMLCanvasElement, image: IImage, modality?: any, renderingEngineId?: string, viewportOptions?: ViewportInputOptions): Promise<string>;
+function renderToCanvasGPU(canvas: HTMLCanvasElement, imageOrVolume: IImage | IVolume, modality?: any, renderingEngineId?: string, viewportOptions?: ViewportInputOptions & {
+    viewReference?: ViewReference;
+}): Promise<CanvasLoadPosition>;
 
 // @public (undocumented)
 enum RequestType {
@@ -3114,7 +3043,7 @@ type StackNewImageEventDetail = {
 };
 
 // @public (undocumented)
-export class StackViewport extends Viewport implements IStackViewport, IImagesLoader {
+export class StackViewport extends Viewport implements StackViewport, IImagesLoader {
     constructor(props: ViewportInput);
     // (undocumented)
     addActor: (actorEntry: ActorEntry) => void;
@@ -3392,7 +3321,7 @@ declare namespace Types {
         IImagesLoader,
         Cornerstone3DConfig,
         ICamera,
-        IStackViewport,
+        StackViewport as IStackViewport,
         IVideoViewport,
         IVolumeViewport,
         IEnabledElement,

common/reviews/api/nifti-volume-loader.api.md

@@ -5,11 +5,14 @@
 ```ts
 
 import type { GetGPUTier } from 'detect-gpu';
-import type { mat4 } from 'gl-matrix';
+import { mat4 } from 'gl-matrix';
 import type { TierResult } from 'detect-gpu';
 import type vtkActor from '@kitware/vtk.js/Rendering/Core/Actor';
+import type { vtkCamera } from '@kitware/vtk.js/Rendering/Core/Camera';
 import vtkImageData from '@kitware/vtk.js/Common/DataModel/ImageData';
 import vtkImageSlice from '@kitware/vtk.js/Rendering/Core/ImageSlice';
+import type { vtkObject } from '@kitware/vtk.js/interfaces';
+import vtkPlane from '@kitware/vtk.js/Common/DataModel/Plane';
 import type vtkVolume from '@kitware/vtk.js/Rendering/Core/Volume';
 
 // @public (undocumented)
@@ -43,10 +46,17 @@ declare namespace helpers {
 export { helpers }
 
 // @public (undocumented)
-function makeVolumeMetadata(niftiHeader: any, orientation: any, scalarData: any): Types.Metadata;
+function makeVolumeMetadata(niftiHeader: any, orientation: any, scalarData: any, pixelRepresentation: any): {
+    volumeMetadata: Types.Metadata;
+    dimensions: Types.Point3;
+    direction: Types.Mat3;
+};
 
 // @public (undocumented)
-function modalityScaleNifti(array: Float32Array | Int16Array | Uint8Array, niftiHeader: any): void;
+function modalityScaleNifti(niftiHeader: any, niftiImageBuffer: any): {
+    scalarData: Types.PixelDataTypedArray;
+    pixelRepresentation: number;
+};
 
 // @public (undocumented)
 export class NiftiImageVolume extends ImageVolume {

common/reviews/api/streaming-image-volume-loader.api.md

@@ -5,11 +5,14 @@
 ```ts
 
 import type { GetGPUTier } from 'detect-gpu';
-import type { mat4 } from 'gl-matrix';
+import { mat4 } from 'gl-matrix';
 import type { TierResult } from 'detect-gpu';
 import type vtkActor from '@kitware/vtk.js/Rendering/Core/Actor';
+import type { vtkCamera } from '@kitware/vtk.js/Rendering/Core/Camera';
 import vtkImageData from '@kitware/vtk.js/Common/DataModel/ImageData';
 import vtkImageSlice from '@kitware/vtk.js/Rendering/Core/ImageSlice';
+import type { vtkObject } from '@kitware/vtk.js/interfaces';
+import vtkPlane from '@kitware/vtk.js/Common/DataModel/Plane';
 import type vtkVolume from '@kitware/vtk.js/Rendering/Core/Volume';
 
 // @public (undocumented)

common/reviews/api/tools.api.md

@@ -13,10 +13,13 @@ import type { TierResult } from 'detect-gpu';
 import { vec3 } from 'gl-matrix';
 import type vtkActor from '@kitware/vtk.js/Rendering/Core/Actor';
 import vtkAnnotatedCubeActor from '@kitware/vtk.js/Rendering/Core/AnnotatedCubeActor';
+import type { vtkCamera } from '@kitware/vtk.js/Rendering/Core/Camera';
 import { vtkColorTransferFunction } from '@kitware/vtk.js/Rendering/Core/ColorTransferFunction';
 import { vtkImageData } from '@kitware/vtk.js/Common/DataModel/ImageData';
 import vtkImageSlice from '@kitware/vtk.js/Rendering/Core/ImageSlice';
+import type { vtkObject } from '@kitware/vtk.js/interfaces';
 import type { vtkPiecewiseFunction } from '@kitware/vtk.js/Common/DataModel/PiecewiseFunction';
+import vtkPlane from '@kitware/vtk.js/Common/DataModel/Plane';
 import vtkPolyData from '@kitware/vtk.js/Common/DataModel/PolyData';
 import type vtkVolume from '@kitware/vtk.js/Rendering/Core/Volume';
 
@@ -2585,6 +2588,9 @@ function getCanvasEllipseCorners(ellipseCanvasPoints: CanvasCoordinates): Array<
 // @public (undocumented)
 function getChildAnnotations(annotation: Annotation): Annotation[];
 
+// @public (undocumented)
+function getClosestImageIdForStackViewport(viewport: StackViewport, worldPos: Types_2.Point3, viewPlaneNormal: Types_2.Point3): string;
+
 // @public (undocumented)
 function getClosestLineSegmentIntersection(points: Types_2.Point2[], p1: Types_2.Point2, q1: Types_2.Point2, closed?: boolean): {
     segment: Types_2.Point2;
@@ -6119,7 +6125,8 @@ declare namespace utilities {
         voi,
         AnnotationFrameRange as annotationFrameRange,
         contourSegmentation,
-        annotationHydration
+        annotationHydration,
+        getClosestImageIdForStackViewport
     }
 }
 export { utilities }

lerna.json

@@ -1,5 +1,5 @@
 {
-  "version": "1.74.1",
+  "version": "1.77.2",
   "packages": [
     "packages/adapters",
     "packages/core",