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Typo forgot module
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glormph committed Apr 30, 2024
1 parent 7dc1b02 commit d91f55d
Showing 1 changed file with 1 addition and 1 deletion.
2 changes: 1 addition & 1 deletion src/backend/analysis/jobs.py
Original file line number Diff line number Diff line change
Expand Up @@ -54,7 +54,7 @@ def process(self, **kwargs):
mzml_nonrefined = mzmlfiles.exclude(rawfile__storedfile__in=existing_refined).select_related('mzmlfile__pwiz')
dstshare = rm.ServerShare.objects.get(pk=kwargs['dstshare_id'])
timestamp = datetime.strftime(analysis.date, '%Y%m%d_%H.%M')
runpath = sub('[^a-zA-Z0-9\.\-_]', '_', f'{analysis.id}_{analysis.name}_{timestamp}')
runpath = re.sub('[^a-zA-Z0-9\.\-_]', '_', f'{analysis.id}_{analysis.name}_{timestamp}')
mzmls = []
for x in mzml_nonrefined:
# FIXME In task: ln -s {dbid}___{fn}_refined.mzML name as input, leave out that part
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