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[pre-commit.ci] auto fixes from pre-commit.com hooks #216

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[pre-commit.ci] auto fixes from pre-commit.com hooks

[pre-commit.ci] auto fixes from pre-commit.com hooks #216

Workflow file for this run

.github/workflows/ci.yml at 7910211
name: Tests
on: [push]
jobs:
code:
name: Code
runs-on: ubuntu-latest
strategy:
fail-fast: false
matrix:
task: [flake8, black, isort]
steps:
- uses: actions/checkout@v2
- name: Set up Python 3.8
uses: actions/setup-python@v2
with:
python-version: 3.8
- name: Install dependencies
run: |
pip install --upgrade pip
pip install tox
- name: Run task
run: tox -e ${{ matrix.task }}
manifest:
name: Check Manifest
needs: code
runs-on: ubuntu-latest
steps:
- uses: actions/checkout@v2
- name: Set up Python 3.8
uses: actions/setup-python@v2
with:
python-version: 3.8
- name: Install dependencies
run: |
pip install --upgrade pip
pip install check-manifest
- name: Check Manifest
run: check-manifest
test:
needs: code
name: ${{ matrix.platform }} py${{ matrix.python }} ${{ matrix.toxenv }}
runs-on: ${{ matrix.platform }}
strategy:
fail-fast: false
matrix:
platform: [ubuntu-latest, windows-latest, macos-latest]
python: [3.7, 3.8, 3.9]
steps:
- uses: actions/checkout@v2
- name: Set up Python ${{ matrix.python }}
uses: actions/setup-python@v2
with:
python-version: ${{ matrix.python }}
- name: Install dependencies
run: |
pip install --upgrade pip
pip install setuptools tox tox-gh-actions
# here we pass off control of environment creation and running of tests to tox
# tox-gh-actions, installed above, helps to convert environment variables into
# tox "factors" ... limiting the scope of what gets tested on each platform
# The one exception is if the "toxenv" environment variable has been set,
# in which case we are declaring one specific tox environment to run.
# see tox.ini for more
- name: Test with tox
run: tox
env:
PLATFORM: ${{ matrix.platform }}
TOXENV: ${{ matrix.toxenv }}
# test_pip_install:
# name: ubuntu-latest 3.8 pip install
# runs-on: ubuntu-latest
# steps:
# - name: Set up Python 3.8
# uses: actions/setup-python@v2
# with:
# python-version: 3.8
#
# - name: Install this commit
# run: |
# # pip install this git sha directly from github
# pip install --upgrade pip
# pip install git+git://github.com/${{ github.repository }}.git@${{ github.sha }}#egg=msalign[testing]
#
# - name: Test
# run: pytest --pyargs msalign --color=yes
coverage:
name: "Coverage"
runs-on: ubuntu-latest
steps:
- uses: actions/checkout@master
- name: Set up Python
uses: actions/setup-python@v1
with:
python-version: 3.8
- name: Install dependencies
run: |
pip install --upgrade pip
pip install ".[testing]"
- name: Test with pytest
run: |
pytest --cov=msalign
- name: Upload coverage to Codecov
uses: codecov/codecov-action@v1
install-dev:
strategy:
max-parallel: 4
matrix:
os: [ubuntu-latest, windows-latest, macOS-latest]
name: "Verify installation on ${{ matrix.os }}."
runs-on: "${{ matrix.os }}"
steps:
- uses: "actions/checkout@v2"
- uses: "actions/setup-python@v1"
with:
python-version: "3.7"
- name: Install
run: |
pip install -e .
python -c 'import msalign; print(msalign.__version__)'
deploy:
needs: [test]
name: "Deploy"
runs-on: ubuntu-latest
steps:
- uses: actions/checkout@master
- name: Set up Python
uses: actions/setup-python@v1
with:
python-version: 3.8
- name: Install dependencies
run: |
pip install --upgrade pip # || pip3 install --upgrade pip
pip install ".[deploy]"
- name: Build package
run: |
python setup.py sdist bdist_wheel --universal
- name: Publish to Test PyPI
uses: pypa/gh-action-pypi-publish@master
if: github.event_name == 'push' && startsWith(github.event.ref, 'refs/tags')
with:
user: __token__
password: ${{ secrets.pypi_test_password }}
repository_url: https://test.pypi.org/legacy/
- name: Publish to PyPI
uses: pypa/gh-action-pypi-publish@master
if: github.event_name == 'push' && startsWith(github.event.ref, 'refs/tags')
with:
user: __token__
password: ${{ secrets.pypi_password }}