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Provisionally removes previously added literal profile from SSSOM (#383)
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Intermediate PR to make it easier to review the new solution for
representing the literal profile.

Note to reviewers: Whoever approves this, intrinsically approves also
#384 (modulo details). The point to merging this first is to make
reviewing #384 much easier.
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matentzn authored Aug 6, 2024
1 parent 47d2a3f commit bd03f7b
Showing 1 changed file with 0 additions and 85 deletions.
85 changes: 0 additions & 85 deletions src/sssom_schema/schema/sssom_schema.yaml
Original file line number Diff line number Diff line change
Expand Up @@ -125,26 +125,6 @@ slots:
examples:
- value: HP:0009894
description: The CURIE denoting the Human Phenotype Ontology concept of 'Thickened ears'
literal:
description: The literal being mapped
range: string
required: true
mappings:
- owl:annotatedSource
slot_uri: owl:annotatedTarget
examples:
- value: "Alzheimer"
description: A string referring to some thing.
literal_datatype:
description: The datatype of the literal being mapped
range: uri
required: false
mappings:
- rdf:datatype
slot_uri: rdf:datatype
examples:
- value: xsd:string
description: A string referring to some thing.
subject_label:
description: The label of subject of the mapping
range: string
Expand Down Expand Up @@ -388,20 +368,6 @@ slots:
examples:
- value: http://purl.obolibrary.org/obo/mondo/releases/2021-01-30/mondo.owl
description: (A persistent Version IRI pointing to the Mondo version '2021-01-30')
literal_source:
description: URI of ontology source for the literal.
range: EntityReference
examples:
- value: obo:mondo.owl
description: A persistent OBO CURIE pointing to the latest version of the Mondo ontology.
- value: wikidata:Q7876491
description: A Wikidata identifier for the Uberon ontology resource.
literal_source_version:
description: Version IRI or version string of the source of the literal.
range: string
examples:
- value: http://purl.obolibrary.org/obo/mondo/releases/2021-01-30/mondo.owl
description: (A persistent Version IRI pointing to the Mondo version '2021-01-30')
object_source:
description: URI of vocabulary or identifier source for the object.
range: EntityReference
Expand Down Expand Up @@ -528,13 +494,6 @@ slots:
examples:
- value: semapv:Stemming
- value: semapv:StopWordRemoval
literal_preprocessing:
description: Method of preprocessing applied to the literal.
range: EntityReference
multivalued: true
examples:
- value: semapv:Stemming
- value: semapv:StopWordRemoval
curation_rule:
description: A curation rule is a (potentially) complex condition executed by an agent that led to the establishment of a mapping.
Curation rules often involve complex domain-specific considerations, which are hard to capture in an automated fashion. The curation
Expand Down Expand Up @@ -715,50 +674,6 @@ classes:
- other
- comment
class_uri: owl:Axiom
literal mapping:
description: Represents an individual mapping between a literal and an entity.
Note that this schema has been created on 01.08.2023 and is subject to change.
see_also:
- https://mapping-commons.github.io/sssom/sssom-profiles/
slots:
- literal
- literal_datatype
- predicate_id
- predicate_label
- predicate_modifier
- object_id
- object_label
- object_category
- mapping_justification
- author_id
- author_label
- reviewer_id
- reviewer_label
- creator_id
- creator_label
- license
- literal_source
- literal_source_version
- object_type
- object_source
- object_source_version
- mapping_provider
- mapping_source
- mapping_cardinality
- mapping_tool
- mapping_tool_version
- mapping_date
- confidence
- object_match_field
- match_string
- literal_preprocessing
- object_preprocessing
- similarity_score
- similarity_measure
- see_also
- other
- comment
class_uri: owl:Axiom
mapping registry:
description: A registry for managing mapping sets. It holds a set of
mapping set references, and can import other registries.
Expand Down

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