Tensorflow 2 Migration & Docker Support

.gitignore

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+*.log
+python_overnight.sh
+java_overnight.sh
+
+.idea
+sample_data
+
+
+# Created by https://www.toptal.com/developers/gitignore/api/pycharm+all,python
+# Edit at https://www.toptal.com/developers/gitignore?templates=pycharm+all,python
+
+### PyCharm+all ###
+# Covers JetBrains IDEs: IntelliJ, RubyMine, PhpStorm, AppCode, PyCharm, CLion, Android Studio, WebStorm and Rider
+# Reference: https://intellij-support.jetbrains.com/hc/en-us/articles/206544839
+
+# User-specific stuff
+.idea/**/workspace.xml
+.idea/**/tasks.xml
+.idea/**/usage.statistics.xml
+.idea/**/dictionaries
+.idea/**/shelf
+
+# AWS User-specific
+.idea/**/aws.xml
+
+# Generated files
+.idea/**/contentModel.xml
+
+# Sensitive or high-churn files
+.idea/**/dataSources/
+.idea/**/dataSources.ids
+.idea/**/dataSources.local.xml
+.idea/**/sqlDataSources.xml
+.idea/**/dynamic.xml
+.idea/**/uiDesigner.xml
+.idea/**/dbnavigator.xml
+
+# Gradle
+.idea/**/gradle.xml
+.idea/**/libraries
+
+# Gradle and Maven with auto-import
+# When using Gradle or Maven with auto-import, you should exclude module files,
+# since they will be recreated, and may cause churn.  Uncomment if using
+# auto-import.
+# .idea/artifacts
+# .idea/compiler.xml
+# .idea/jarRepositories.xml
+# .idea/modules.xml
+# .idea/*.iml
+# .idea/modules
+# *.iml
+# *.ipr
+
+# CMake
+cmake-build-*/
+
+# Mongo Explorer plugin
+.idea/**/mongoSettings.xml
+
+# File-based project format
+*.iws
+
+# IntelliJ
+out/
+
+# mpeltonen/sbt-idea plugin
+.idea_modules/
+
+# JIRA plugin
+atlassian-ide-plugin.xml
+
+# Cursive Clojure plugin
+.idea/replstate.xml
+
+# SonarLint plugin
+.idea/sonarlint/
+
+# Crashlytics plugin (for Android Studio and IntelliJ)
+com_crashlytics_export_strings.xml
+crashlytics.properties
+crashlytics-build.properties
+fabric.properties
+
+# Editor-based Rest Client
+.idea/httpRequests
+
+# Android studio 3.1+ serialized cache file
+.idea/caches/build_file_checksums.ser
+
+### PyCharm+all Patch ###
+# Ignores the whole .idea folder and all .iml files
+# See https://github.com/joeblau/gitignore.io/issues/186 and https://github.com/joeblau/gitignore.io/issues/360
+
+.idea/*
+
+# Reason: https://github.com/joeblau/gitignore.io/issues/186#issuecomment-249601023
+
+*.iml
+modules.xml
+.idea/misc.xml
+*.ipr
+
+# Sonarlint plugin
+.idea/sonarlint
+
+### Python ###
+# Byte-compiled / optimized / DLL files
+__pycache__/
+*.py[cod]
+*$py.class
+
+# C extensions
+*.so
+
+# Distribution / packaging
+.Python
+build/
+develop-eggs/
+dist/
+downloads/
+eggs/
+.eggs/
+lib/
+lib64/
+parts/
+sdist/
+var/
+wheels/
+share/python-wheels/
+*.egg-info/
+.installed.cfg
+*.egg
+MANIFEST
+
+# PyInstaller
+#  Usually these files are written by a python script from a template
+#  before PyInstaller builds the exe, so as to inject date/other infos into it.
+*.manifest
+*.spec
+
+# Installer logs
+pip-log.txt
+pip-delete-this-directory.txt
+
+# Unit test / coverage reports
+htmlcov/
+.tox/
+.nox/
+.coverage
+.coverage.*
+.cache
+nosetests.xml
+coverage.xml
+*.cover
+*.py,cover
+.hypothesis/
+.pytest_cache/
+cover/
+
+# Translations
+*.mo
+*.pot
+
+# Django stuff:
+*.log
+local_settings.py
+db.sqlite3
+db.sqlite3-journal
+
+# Flask stuff:
+instance/
+.webassets-cache
+
+# Scrapy stuff:
+.scrapy
+
+# Sphinx documentation
+docs/_build/
+
+# PyBuilder
+.pybuilder/
+target/
+
+# Jupyter Notebook
+.ipynb_checkpoints
+
+# IPython
+profile_default/
+ipython_config.py
+
+# pyenv
+#   For a library or package, you might want to ignore these files since the code is
+#   intended to run in multiple environments; otherwise, check them in:
+# .python-version
+
+# pipenv
+#   According to pypa/pipenv#598, it is recommended to include Pipfile.lock in version control.
+#   However, in case of collaboration, if having platform-specific dependencies or dependencies
+#   having no cross-platform support, pipenv may install dependencies that don't work, or not
+#   install all needed dependencies.
+#Pipfile.lock
+
+# poetry
+#   Similar to Pipfile.lock, it is generally recommended to include poetry.lock in version control.
+#   This is especially recommended for binary packages to ensure reproducibility, and is more
+#   commonly ignored for libraries.
+#   https://python-poetry.org/docs/basic-usage/#commit-your-poetrylock-file-to-version-control
+#poetry.lock
+
+# PEP 582; used by e.g. github.com/David-OConnor/pyflow
+__pypackages__/
+
+# Celery stuff
+celerybeat-schedule
+celerybeat.pid
+
+# SageMath parsed files
+*.sage.py
+
+# Environments
+.env
+.venv
+env/
+venv/
+ENV/
+env.bak/
+venv.bak/
+
+# Spyder project settings
+.spyderproject
+.spyproject
+
+# Rope project settings
+.ropeproject
+
+# mkdocs documentation
+/site
+
+# mypy
+.mypy_cache/
+.dmypy.json
+dmypy.json
+
+# Pyre type checker
+.pyre/
+
+# pytype static type analyzer
+.pytype/
+
+# Cython debug symbols
+cython_debug/
+
+# PyCharm
+#  JetBrains specific template is maintainted in a separate JetBrains.gitignore that can
+#  be found at https://github.com/github/gitignore/blob/main/Global/JetBrains.gitignore
+#  and can be added to the global gitignore or merged into this file.  For a more nuclear
+#  option (not recommended) you can uncomment the following to ignore the entire idea folder.
+#.idea/
+
+# End of https://www.toptal.com/developers/gitignore/api/pycharm+all,python

Dockerfile

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+FROM nvcr.io/nvidia/tensorflow:22.01-tf2-py3
+# The Tag 22.01 stands for january 2022.
+# The version 22.01 comes with tensorflow 2.6 and python 3.8
+
+# Entry-Point Orchestration-Flags
+ENV DO_TRAIN="true"
+ENV DO_TEST="true"
+ENV DO_COMPLETION="true"
+
+ENV VERBOSE="false"
+
+# Filenames
+ENV TRAIN_FILE=java_training_slp_pre_enc_bpe_10000
+ENV VALIDATION_FILE=java_validation_slp_pre_enc_bpe_10000
+ENV TEST_FILE=java_test_slp_pre_enc_bpe_10000
+ENV TEST_PROJ_NAMES_FILE=testProjects
+ENV ID_MAP_FILE=/data/java/id_map_java_test_slp_pre_bpe_10000
+# Directory that contains train/validation/test data etc.
+ENV DATA_HOME=/data/java/
+# Directory in which the model will be saved.
+ENV MODEL_DIR=/models/java/model
+
+# Maximum training epochs
+ENV EPOCHS=2
+# Initial learning rate
+ENV LR=0.1
+# Training batch size
+ENV BATCH_SIZE=32
+# RNN unroll timesteps for gradient calculation.
+ENV STEPS=200
+# 1 - Dropout probability
+ENV KEEP_PROB=0.5
+# RNN hidden state size
+ENV STATE_DIMS=512
+# Checkpoint and validation loss calculation frequency.
+ENV CHECKPOINT_EVERY=5000
+
+
+WORKDIR /openvocabcodenlm
+
+COPY reduced_requirements.txt .
+RUN pip install -r reduced_requirements.txt
+
+COPY util util
+COPY reader.py .
+COPY code_nlm.py .
+COPY create_subtoken_data.py .
+COPY non-ascii_sequences_to_unk.py .
+
+COPY entrypoint.sh .
+
+ENTRYPOINT ["bash","entrypoint.sh"]