Fix GCs value on SVG export

merenlab · Jun 13, 2024 · c957c6c · c957c6c
1 parent 835600d
commit c957c6c
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Showing 2 changed files with 9 additions and 4 deletions.
diff --git a/anvio/data/interactive/js/main.js b/anvio/data/interactive/js/main.js
@@ -2086,8 +2086,13 @@ async function exportSvg(dontDownload) {
             };
 
             if (mode == 'pan') {
-                _bin_info['gene_clusters'] = $('#completeness_' + bin_id).val();
-                _bin_info['gene-calls'] = $('#redundancy_' + bin_id).val();
+                var geneClustersElement = $(bin).find('.num-gene-clusters');        
+                if (geneClustersElement.length > 0) {
+                    _bin_info['gene_clusters'] = geneClustersElement.attr('data-value');
+                } else {
+                    console.log("geneClustersElement not found");
+                }
+                _bin_info['gene-calls'] = $(bin).find('.num-gene-calls input').val();
             } else {
                 _bin_info['contig-length'] = $(bin).find('.length-sum span').text();
                 _bin_info['contig-count'] = $(bin).find('.num-items input').val();

diff --git a/anvio/data/interactive/js/svg-helpers.js b/anvio/data/interactive/js/svg-helpers.js
@@ -150,7 +150,7 @@ function drawBinLegend(bins_to_draw, top, left) {
     drawText('bin_legend', {'x': left + 30, 'y': top}, 'Name', '10px');
 
     if (mode == 'pan') {
-        drawText('bin_legend', {'x': left + 170, 'y': top}, 'PCs', '10px');
+        drawText('bin_legend', {'x': left + 170, 'y': top}, 'GCs', '10px');
         drawText('bin_legend', {'x': left + 230, 'y': top}, 'Gene Calls', '10px');
     } else {
         drawText('bin_legend', {'x': left + 170, 'y': top}, 'Contigs', '10px');
@@ -165,7 +165,7 @@ function drawBinLegend(bins_to_draw, top, left) {
         drawText('bin_legend', {'x': left + 30, 'y': top }, bin['name'], '12px');
 
         if (mode == 'pan') {
-            drawText('bin_legend', {'x': left + 170, 'y': top}, bin['pcs'], '12px');
+            drawText('bin_legend', {'x': left + 170, 'y': top}, bin['gene_clusters'], '12px');
             drawText('bin_legend', {'x': left + 230, 'y': top}, bin['gene-calls'], '12px');
         } else {
             drawText('bin_legend', {'x': left + 170, 'y': top}, bin['contig-count'], '12px');