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| #!/bin/sh | ||
| # The Prerequisites | ||
| # ================= | ||
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| set -euo pipefail | ||
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| #export MODULEPATH="/cm/local/modulefiles:/cm/shared/modulefiles" | ||
| # | ||
| #module() { eval `/cm/local/apps/environment-modules/3.2.10/Modules/$MODULE_VERSION/bin/modulecmd bash $*`; } | ||
| #export -f module | ||
| # | ||
| #PKG_CONFIG_PATH="${PKG_CONFIG_PATH%:}" | ||
| #PKG_CONFIG_PATH="${PKG_CONFIG_PATH#:}" | ||
| # | ||
| #PATH="$HOME/.cabal/bin:$HOME/opt/bin:$PATH" | ||
| # | ||
| #module load opencl-nvidia/9.0 | ||
| #module load cuda90/blas/9.0.176 | ||
| #module load cuda90/fft/9.0.176 | ||
| #module load cuda90/nsight/9.0.176 | ||
| #module load cuda90/profiler/9.0.176 | ||
| #module load cuda90/toolkit/9.0.176 | ||
| #module load prun | ||
| #module load slurm | ||
| #module load prun-slurm | ||
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| # * CUDA 9 (searches includes and libraries relative to CUDA\_PATH environment | ||
| # variable) | ||
| # | ||
| # * OpenCL (looks for libraries in path specified by OPENCL\_LIB environment | ||
| # variable) | ||
| # | ||
| # * A C++17 supporting compiler (e.g., g++ 7.x or clang++ 5.x) | ||
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| PARALLEL=$(awk '/^processor/{n+=1}END{print n}' /proc/cpuinfo) | ||
| INSTALL_PATH=$HOME/opt/ | ||
| PATH="$HOME/.cabal/bin:$INSTALL_PATH/bin/:$PATH" | ||
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| wget https://cmake.org/files/v3.12/cmake-3.12.1.tar.gz | ||
| wget https://releases.llvm.org/6.0.1/llvm-6.0.1.src.tar.xz | ||
| wget https://releases.llvm.org/6.0.1/cfe-6.0.1.src.tar.xz | ||
| wget https://releases.llvm.org/6.0.1/compiler-rt-6.0.1.src.tar.xz | ||
| wget https://releases.llvm.org/6.0.1/libcxx-6.0.1.src.tar.xz | ||
| wget https://releases.llvm.org/6.0.1/libcxxabi-6.0.1.src.tar.xz | ||
| wget https://releases.llvm.org/6.0.1/libunwind-6.0.1.src.tar.xz | ||
| wget https://releases.llvm.org/6.0.1/openmp-6.0.1.src.tar.xz | ||
| wget https://releases.llvm.org/6.0.1/polly-6.0.1.src.tar.xz | ||
| wget https://releases.llvm.org/6.0.1/clang-tools-extra-6.0.1.src.tar.xz | ||
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| tar xf cmake-3.12.1.tar.gz | ||
| rm cmake-3.12.1.tar.gz | ||
| cd cmake-3.12.1/ | ||
| ./bootstrap --prefix=$INSTALL_PATH --parallel=$PARALLEL | ||
| make | ||
| make install | ||
| hash -r | ||
| cd .. | ||
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| tar xf llvm-6.0.1.src.tar.xz | ||
| rm llvm-6.0.1.src.tar.xz | ||
| tar xf cfe-6.0.1.src.tar.xz | ||
| mv cfe-6.0.1.src llvm-6.0.1.src/tools/clang | ||
| rm cfe-6.0.1.src.tar.xz | ||
| tar xf clang-tools-extra-6.0.1.src.tar.xz | ||
| mv clang-tools-extra-6.0.1.src llvm-6.0.1.src/tools/clang/tools/extra | ||
| rm clang-tools-extra-6.0.1.src.tar.xz | ||
| tar xf compiler-rt-6.0.1.src.tar.xz | ||
| mv compiler-rt-6.0.1.src llvm-6.0.1.src/projects/compiler-rt | ||
| rm compiler-rt-6.0.1.src.tar.xz | ||
| tar xf libcxx-6.0.1.src.tar.xz | ||
| mv libcxx-6.0.1.src llvm-6.0.1.src/projects/libcxx | ||
| rm libcxx-6.0.1.src.tar.xz | ||
| tar xf polly-6.0.1.src.tar.xz | ||
| mv polly-6.0.1.src llvm-6.0.1.src/tools/polly | ||
| rm polly-6.0.1.src.tar.xz | ||
| tar xf openmp-6.0.1.src.tar.xz | ||
| mv openmp-6.0.1.src llvm-6.0.1.src/projects/openmp | ||
| rm openmp-6.0.1.src.tar.xz | ||
| tar xf libcxxabi-6.0.1.src.tar.xz | ||
| mv libcxxabi-6.0.1.src llvm-6.0.1.src/projects/libcxxabi | ||
| rm libcxxabi-6.0.1.src.tar.xz | ||
| tar xf libunwind-6.0.1.src.tar.xz | ||
| mv libunwind-6.0.1.src llvm-6.0.1.src/runtimes/libunwind | ||
| rm libunwind-6.0.1.src.tar.xz | ||
| mkdir build | ||
| cd build/ | ||
| CC=gcc CXX=g++ cmake ../llvm-6.0.1.src/ -DCMAKE_INSTALL_PREFIX=$INSTALL_PATH -DCMAKE_BUILD_TYPE=Release -DLLVM_TARGETS_TO_BUILD=X86 | ||
| make -j$PARALLEL | ||
| make install | ||
| hash -r | ||
| cd .. | ||
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| # * Boost (looks for includes and libraries relative to BOOST\_PATH, defaults | ||
| # to $HOME/opt/) | ||
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| wget https://dl.bintray.com/boostorg/release/1.68.0/source/boost_1_68_0.tar.gz | ||
| tar xvf boost_1_68_0.tar.gz | ||
| rm boost_1_68_0.tar.gz | ||
| cd boost_1_68_0 | ||
| ./bootstrap.sh --with-toolset=clang --prefix=$INSTALL_PATH | ||
| ./b2 toolset=clang cxxflags="-stdlib=libc++" linkflags="-stdlib=libc++" -j$PARALLEL | ||
| ./b2 install | ||
| cd .. | ||
| rm -r boost_1_68_0 | ||
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| # * GHC 8.4 | ||
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| wget https://downloads.haskell.org/~ghc/8.4.3/ghc-8.4.3-x86_64-deb8-linux-dwarf.tar.xz | ||
| tar xvf ghc-8.4.3-x86_64-deb8-linux-dwarf.tar.xz | ||
| rm ghc-8.4.3-x86_64-deb8-linux-dwarf.tar.xz | ||
| cd ghc-8.4.3 | ||
| ./configure --prefix=$INSTALL_PATH | ||
| make install | ||
| hash -r | ||
| cd .. | ||
| rm -r ghc-8.4.3 | ||
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| # * cabal-install 2.4 | ||
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| git clone https://github.com/haskell/cabal.git | ||
| cd cabal/cabal-install | ||
| ./bootstrap.sh -j $PARALLEL | ||
| cabal new-update | ||
| cd ../.. | ||
| rm -fr cabal | ||
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| # * ICC (Only required for evolutionary graph generation) | ||
| # | ||
| # * setuptools | ||
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| virtualenv $INSTALL_PATH/ | ||
| pip install setuptools --upgrade | ||
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| # * NumPy, SciPy, scikit-learn, matplotlib | ||
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| pip install numpy scipy scikit-learn matplotlib |