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update to MP HP header mapping
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Update to MP_HP_upper_level SSSOM file
removed unmapped terms
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@sbello
sbello committed Feb 9, 2024
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11 changes: 0 additions & 11 deletions mappings/MP_HP_upper_level_SSSOM.tsv
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Original file line number Diff line number Diff line change
@@ -1,7 +1,5 @@
object_id object_label predicate_id confidence subject_id subject_label match_type creator_id
HP:0003270 Abdominal distention rdfs:subClassOf 1 MP:0005378 growth/size/body region phenotype semapv:ManualMappingCuration https://orcid.org/0000-0003-4606-0597
HP:0002027 Abdominal pain rdfs:subClassOf semapv:ManualMappingCuration https://orcid.org/0000-0003-4606-0597
HP:0011458 Abdominal symptom rdfs:subClassOf semapv:ManualMappingCuration https://orcid.org/0000-0003-4606-0597
HP:0009124 Abnormal adipose tissue morphology rdfs:subClassOf 1 MP:0005375 adipose tissue phenotype semapv:ManualMappingCuration https://orcid.org/0000-0003-4606-0597
HP:0030142 Abnormal bowel sounds rdfs:subClassOf 1 MP:0005381 digestive/alimentary phenotype semapv:ManualMappingCuration https://orcid.org/0000-0003-4606-0597
HP:0025354 Abnormal cellular phenotype rdfs:subClassOf 1 MP:0005384 cellular phenotype semapv:ManualMappingCuration https://orcid.org/0000-0003-4606-0597
Expand All @@ -15,16 +13,12 @@ HP:0012029 Abnormal urine hormone level rdfs:subClassOf 1 MP:0005376 homeostasis
HP:0001194 Abnormalities of placenta or umbilical cord rdfs:subClassOf 1 MP:0005380 embryo phenotype semapv:ManualMappingCuration https://orcid.org/0000-0003-4606-0597
HP:0011620 Abnormality of abdominal situs rdfs:subClassOf 1 MP:0005378 growth/size/body region phenotype semapv:ManualMappingCuration https://orcid.org/0000-0003-4606-0597
HP:0001871 Abnormality of blood and blood-forming tissues rdfs:subClassOf 1 MP:0005397 hematopoietic system phenotype semapv:ManualMappingCuration https://orcid.org/0000-0003-4606-0597
HP:0003549 Abnormality of connective tissue rdfs:subClassOf semapv:ManualMappingCuration https://orcid.org/0000-0003-4606-0597
HP:0000152 Abnormality of head or neck rdfs:subClassOf semapv:ManualMappingCuration https://orcid.org/0000-0003-4606-0597
HP:0000816 Abnormality of Krebs cycle metabolism rdfs:subClassOf 1 MP:0005384 cellular phenotype semapv:ManualMappingCuration https://orcid.org/0000-0003-4606-0597
HP:0040064 Abnormality of limbs rdfs:subClassOf 1 MP:0005371 limbs/digits/tail phenotype semapv:ManualMappingCuration https://orcid.org/0000-0003-4606-0597
HP:0100016 Abnormal mesentery morphology rdfs:subClassOf 1 MP:0005378 growth/size/body region phenotype semapv:ManualMappingCuration https://orcid.org/0000-0003-4606-0597
HP:0001939 Abnormality of metabolism/homeostasis rdfs:subClassOf 1 MP:0005376 homeostasis/metabolism phenotype semapv:ManualMappingCuration https://orcid.org/0000-0003-4606-0597
HP:3000050 Abnormal odontoid tissue morphology rdfs:subClassOf 1 MP:0005382 craniofacial phenotype semapv:ManualMappingCuration https://orcid.org/0000-0003-4606-0597
HP:0001197 Abnormality of prenatal development or birth rdfs:subClassOf semapv:ManualMappingCuration https://orcid.org/0000-0003-4606-0597
HP:0001438 Abnormal abdomen morphology rdfs:subClassOf 1 MP:0005378 growth/size/body region phenotype semapv:ManualMappingCuration https://orcid.org/0000-0003-4606-0597
HP:0002012 Abnormality of the abdominal organs rdfs:subClassOf semapv:ManualMappingCuration https://orcid.org/0000-0003-4606-0597
HP:0004298 Abnormality of the abdominal wall rdfs:subClassOf 1 MP:0005378 growth/size/body region phenotype semapv:ManualMappingCuration https://orcid.org/0000-0003-4606-0597
HP:0001560 Abnormality of the amniotic fluid rdfs:subClassOf 1 MP:0005380 embryo phenotype semapv:ManualMappingCuration https://orcid.org/0000-0003-4606-0597
HP:0000769 Abnormality of the breast rdfs:subClassOf 1 MP:0010771 integument phenotype semapv:ManualMappingCuration https://orcid.org/0000-0003-4606-0597
Expand All @@ -36,7 +30,6 @@ HP:0000478 Abnormality of the eye rdfs:subClassOf 1 MP:0005391 vision/eye phenot
HP:0100536 Abnormality of the fascia rdfs:subClassOf 1 MP:0010771 integument phenotype semapv:ManualMappingCuration https://orcid.org/0000-0003-4606-0597
HP:0011024 Abnormality of the gastrointestinal tract rdfs:subClassOf 1 MP:0005381 digestive/alimentary phenotype semapv:ManualMappingCuration https://orcid.org/0000-0003-4606-0597
HP:0000078 Abnormality of the genital system rdfs:subClassOf 1 MP:0005389 reproductive system phenotype semapv:ManualMappingCuration https://orcid.org/0000-0003-4606-0597
HP:0000119 Abnormality of the genitourinary system rdfs:subClassOf semapv:ManualMappingCuration https://orcid.org/0000-0003-4606-0597
HP:0000234 Abnormality of the head rdfs:subClassOf 1 MP:0005382 craniofacial phenotype semapv:ManualMappingCuration https://orcid.org/0000-0003-4606-0597
HP:0002715 Abnormality of the immune system rdfs:subClassOf 1 MP:0005387 immune system phenotype semapv:ManualMappingCuration https://orcid.org/0000-0003-4606-0597
HP:0001574 Abnormality of the integument rdfs:subClassOf 1 MP:0010771 integument phenotype semapv:ManualMappingCuration https://orcid.org/0000-0003-4606-0597
Expand Down Expand Up @@ -84,7 +77,6 @@ HP:0001789 Hydrops fetalis rdfs:subClassOf 1 MP:0005376 homeostasis/metabolism p
HP:0031058 Impairment of activities of daily living rdfs:subClassOf 1 MP:0005386 behavior/neurological phenotype semapv:ManualMappingCuration https://orcid.org/0000-0003-4606-0597
HP:0008985 Increased intramuscular fat rdfs:subClassOf 1 MP:0005375 adipose tissue phenotype semapv:ManualMappingCuration https://orcid.org/0000-0003-4606-0597
HP:0010880 Increased nuchal translucency rdfs:subClassOf 1 MP:0005380 embryo phenotype semapv:ManualMappingCuration https://orcid.org/0000-0003-4606-0597
HP:0004395 Malnutrition rdfs:subClassOf semapv:ManualMappingCuration https://orcid.org/0000-0003-4606-0597
HP:0040006 Mortality/Aging skos:exactMatch 1 MP:0010768 mortality/aging semapv:ManualMappingCuration https://orcid.org/0000-0003-4606-0597
HP:0002017 Nausea and vomiting rdfs:subClassOf 1 MP:0005381 digestive/alimentary phenotype semapv:ManualMappingCuration https://orcid.org/0000-0003-4606-0597
HP:0002664 Neoplasm rdfs:subClassOf 1 MP:0002006 neoplasm semapv:ManualMappingCuration https://orcid.org/0000-0003-4606-0597
Expand All @@ -100,15 +92,12 @@ HP:0001622 Premature birth rdfs:subClassOf 1 MP:0005389 reproductive system phen
HP:0002686 Pregnancy history rdfs:subClassOf 1 MP:0005389 reproductive system phenotype semapv:ManualMappingCuration https://orcid.org/0000-0003-4606-0597
HP:0001557 Prenatal movement abnormality rdfs:subClassOf 1 MP:0005386 behavior/neurological phenotype semapv:ManualMappingCuration https://orcid.org/0000-0003-4606-0597
HP:0002038 Protein avoidance rdfs:subClassOf 1 MP:0005386 behavior/neurological phenotype semapv:ManualMappingCuration https://orcid.org/0000-0003-4606-0597
HP:0008373 Puberty and gonadal disorders rdfs:subClassOf semapv:ManualMappingCuration https://orcid.org/0000-0003-4606-0597
HP:0100699 Scarring rdfs:subClassOf 1 MP:0005376 homeostasis/metabolism phenotype semapv:ManualMappingCuration https://orcid.org/0000-0003-4606-0597
HP:0000020 Urinary incontinence rdfs:subClassOf 1 MP:0005367 renal/urinary system phenotype semapv:ManualMappingCuration https://orcid.org/0000-0003-4606-0597
HP:0100589 Urogenital fistula rdfs:subClassOf 1 MP:0005389 reproductive system phenotype semapv:ManualMappingCuration https://orcid.org/0000-0003-4606-0597
HP:0100589 Urogenital fistula rdfs:subClassOf 1 MP:0005367 renal/urinary system phenotype semapv:ManualMappingCuration https://orcid.org/0000-0003-4606-0597
HP:0003271 Visceromegaly rdfs:subClassOf 1 MP:0005378 growth/size/body region phenotype semapv:ManualMappingCuration https://orcid.org/0000-0003-4606-0597
HP:0033334 Abnormal embryonic development rdfs:subClassOf 1 MP:0005380 embryo phenotype semapv:ManualMappingCuration https://orcid.org/0000-0003-4606-0597
HP:0025142 Constitutional symptom rdfs:subClassOf semapv:ManualMappingCuration https://orcid.org/0000-0003-4606-0597
HP:0500001 Body odor rdfs:subClassOf semapv:ManualMappingCuration https://orcid.org/0000-0003-4606-0597
HP:0033850 Coldness rdfs:subClassOf 1 MP:0005376 homeostasis/metabolism phenotype semapv:ManualMappingCuration https://orcid.org/0000-0003-4606-0597
HP:0003546 Exercise intolerance rdfs:subClassOf 1 MP:0005376 homeostasis/metabolism phenotype semapv:ManualMappingCuration https://orcid.org/0000-0003-4606-0597
HP:0100758 Gangrene rdfs:subClassOf 1 MP:0005384 cellular phenotype semapv:ManualMappingCuration https://orcid.org/0000-0003-4606-0597
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