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Closes #3943
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@anna-anagnostop
anna-anagnostop committed Mar 11, 2024
1 parent a4e3298 commit f808620
Showing 1 changed file with 36 additions and 8 deletions.
44 changes: 36 additions & 8 deletions src/ontology/mp-edit.owl
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Original file line number Diff line number Diff line change
Expand Up @@ -14532,6 +14532,8 @@ Declaration(Class(<http://purl.obolibrary.org/obo/MP_0031611>))
Declaration(Class(<http://purl.obolibrary.org/obo/MP_0031612>))
Declaration(Class(<http://purl.obolibrary.org/obo/MP_0031613>))
Declaration(Class(<http://purl.obolibrary.org/obo/MP_0031614>))
Declaration(Class(<http://purl.obolibrary.org/obo/MP_0031615>))
Declaration(Class(<http://purl.obolibrary.org/obo/MP_0031616>))
Declaration(Class(<http://purl.obolibrary.org/obo/MP_3000001>))
Declaration(Class(<http://purl.obolibrary.org/obo/MP_3000002>))
Declaration(Class(<http://purl.obolibrary.org/obo/MP_3000003>))
Expand Down Expand Up @@ -14644,7 +14646,7 @@ AnnotationAssertion(rdfs:label <http://www.geneontology.org/formats/oboInOwl#has

AnnotationAssertion(rdfs:label <http://www.geneontology.org/formats/oboInOwl#hasDbXref> "database_cross_reference")

# Annotation Property: <http://www.geneontology.org/formats/oboInOwl#hasExactSynonym> (has_exact_synonym)
# Annotation Property: <http://www.geneontology.org/formats/oboInOwl#hasExactSynonym> (has exact synonym)

AnnotationAssertion(rdfs:label <http://www.geneontology.org/formats/oboInOwl#hasExactSynonym> "has_exact_synonym")

Expand Down Expand Up @@ -104529,8 +104531,8 @@ AnnotationAssertion(<http://www.geneontology.org/formats/oboInOwl#hasOBONamespac
AnnotationAssertion(<http://www.geneontology.org/formats/oboInOwl#id> <http://purl.obolibrary.org/obo/MP_0010399> "MP:0010399")
AnnotationAssertion(rdfs:label <http://purl.obolibrary.org/obo/MP_0010399> "decreased skeletal muscle glycogen level")
EquivalentClasses(<http://purl.obolibrary.org/obo/MP_0010399> ObjectSomeValuesFrom(<http://purl.obolibrary.org/obo/BFO_0000051> ObjectIntersectionOf(<http://purl.obolibrary.org/obo/PATO_0001997> ObjectSomeValuesFrom(<http://purl.obolibrary.org/obo/RO_0000052> ObjectIntersectionOf(<http://purl.obolibrary.org/obo/CHEBI_28087> ObjectSomeValuesFrom(<http://purl.obolibrary.org/obo/BFO_0000050> <http://purl.obolibrary.org/obo/UBERON_0001134>))) ObjectSomeValuesFrom(<http://purl.obolibrary.org/obo/RO_0002573> <http://purl.obolibrary.org/obo/PATO_0000460>))))
SubClassOf(<http://purl.obolibrary.org/obo/MP_0010399> <http://purl.obolibrary.org/obo/MP_0005439>)
SubClassOf(<http://purl.obolibrary.org/obo/MP_0010399> <http://purl.obolibrary.org/obo/MP_0014069>)
SubClassOf(<http://purl.obolibrary.org/obo/MP_0010399> <http://purl.obolibrary.org/obo/MP_0031615>)

# Class: <http://purl.obolibrary.org/obo/MP_0010400> (increased liver glycogen level)

Expand All @@ -104557,8 +104559,8 @@ AnnotationAssertion(<http://www.geneontology.org/formats/oboInOwl#hasOBONamespac
AnnotationAssertion(<http://www.geneontology.org/formats/oboInOwl#id> <http://purl.obolibrary.org/obo/MP_0010401> "MP:0010401")
AnnotationAssertion(rdfs:label <http://purl.obolibrary.org/obo/MP_0010401> "increased skeletal muscle glycogen level")
EquivalentClasses(<http://purl.obolibrary.org/obo/MP_0010401> ObjectSomeValuesFrom(<http://purl.obolibrary.org/obo/BFO_0000051> ObjectIntersectionOf(<http://purl.obolibrary.org/obo/PATO_0000470> ObjectSomeValuesFrom(<http://purl.obolibrary.org/obo/RO_0000052> ObjectIntersectionOf(<http://purl.obolibrary.org/obo/CHEBI_28087> ObjectSomeValuesFrom(<http://purl.obolibrary.org/obo/BFO_0000050> <http://purl.obolibrary.org/obo/UBERON_0001134>))) ObjectSomeValuesFrom(<http://purl.obolibrary.org/obo/RO_0002573> <http://purl.obolibrary.org/obo/PATO_0000460>))))
SubClassOf(<http://purl.obolibrary.org/obo/MP_0010401> <http://purl.obolibrary.org/obo/MP_0005440>)
SubClassOf(<http://purl.obolibrary.org/obo/MP_0010401> <http://purl.obolibrary.org/obo/MP_0014069>)
SubClassOf(<http://purl.obolibrary.org/obo/MP_0010401> <http://purl.obolibrary.org/obo/MP_0031616>)

# Class: <http://purl.obolibrary.org/obo/MP_0010402> (ventricular septal defect)

Expand Down Expand Up @@ -149253,11 +149255,11 @@ SubClassOf(<http://purl.obolibrary.org/obo/MP_0014067> <http://purl.obolibrary.o

# Class: <http://purl.obolibrary.org/obo/MP_0014068> (abnormal muscle glycogen level)

AnnotationAssertion(Annotation(<http://www.geneontology.org/formats/oboInOwl#hasDbXref> <https://orcid.org/0000-0002-6490-7723>) <http://purl.obolibrary.org/obo/IAO_0000115> <http://purl.obolibrary.org/obo/MP_0014068> "any anomaly in the concentration of a readily converted carbohydrate reserve in muscle tissue")
AnnotationAssertion(Annotation(<http://www.geneontology.org/formats/oboInOwl#hasDbXref> <https://orcid.org/0000-0002-6490-7723>) <http://purl.obolibrary.org/obo/IAO_0000115> <http://purl.obolibrary.org/obo/MP_0014068> "any anomaly in the concentration of a readily converted carbohydrate reserve in any muscle tissue")
AnnotationAssertion(<http://www.geneontology.org/formats/oboInOwl#hasOBONamespace> <http://purl.obolibrary.org/obo/MP_0014068> "MPheno.ontology")
AnnotationAssertion(<http://www.geneontology.org/formats/oboInOwl#id> <http://purl.obolibrary.org/obo/MP_0014068> "MP:0014068")
AnnotationAssertion(rdfs:label <http://purl.obolibrary.org/obo/MP_0014068> "abnormal muscle glycogen level")
EquivalentClasses(<http://purl.obolibrary.org/obo/MP_0014068> ObjectSomeValuesFrom(<http://purl.obolibrary.org/obo/BFO_0000051> ObjectIntersectionOf(<http://purl.obolibrary.org/obo/PATO_0000070> ObjectSomeValuesFrom(<http://purl.obolibrary.org/obo/RO_0000052> ObjectIntersectionOf(<http://purl.obolibrary.org/obo/CHEBI_28087> ObjectSomeValuesFrom(<http://purl.obolibrary.org/obo/mpath#part_of> <http://purl.obolibrary.org/obo/UBERON_0001630>))) ObjectSomeValuesFrom(<http://purl.obolibrary.org/obo/RO_0002573> <http://purl.obolibrary.org/obo/PATO_0000460>))))
EquivalentClasses(<http://purl.obolibrary.org/obo/MP_0014068> ObjectSomeValuesFrom(<http://purl.obolibrary.org/obo/BFO_0000051> ObjectIntersectionOf(<http://purl.obolibrary.org/obo/PATO_0000070> ObjectSomeValuesFrom(<http://purl.obolibrary.org/obo/RO_0000052> ObjectIntersectionOf(<http://purl.obolibrary.org/obo/CHEBI_28087> ObjectSomeValuesFrom(<http://purl.obolibrary.org/obo/BFO_0000050> <http://purl.obolibrary.org/obo/UBERON_0002385>))) ObjectSomeValuesFrom(<http://purl.obolibrary.org/obo/RO_0002573> <http://purl.obolibrary.org/obo/PATO_0000460>))))
SubClassOf(<http://purl.obolibrary.org/obo/MP_0014068> <http://purl.obolibrary.org/obo/MP_0002108>)
SubClassOf(<http://purl.obolibrary.org/obo/MP_0014068> <http://purl.obolibrary.org/obo/MP_0005437>)

Expand Down Expand Up @@ -149291,8 +149293,8 @@ AnnotationAssertion(<http://www.geneontology.org/formats/oboInOwl#hasExactSynony
AnnotationAssertion(<http://www.geneontology.org/formats/oboInOwl#id> <http://purl.obolibrary.org/obo/MP_0014071> "MP:0014071")
AnnotationAssertion(rdfs:label <http://purl.obolibrary.org/obo/MP_0014071> "increased cardiac muscle glycogen level")
EquivalentClasses(<http://purl.obolibrary.org/obo/MP_0014071> ObjectSomeValuesFrom(<http://purl.obolibrary.org/obo/BFO_0000051> ObjectIntersectionOf(<http://purl.obolibrary.org/obo/PATO_0000470> ObjectSomeValuesFrom(<http://purl.obolibrary.org/obo/RO_0000052> ObjectIntersectionOf(<http://purl.obolibrary.org/obo/CHEBI_28087> ObjectSomeValuesFrom(<http://purl.obolibrary.org/obo/BFO_0000050> <http://purl.obolibrary.org/obo/UBERON_0001133>))) ObjectSomeValuesFrom(<http://purl.obolibrary.org/obo/RO_0002573> <http://purl.obolibrary.org/obo/PATO_0000460>))))
SubClassOf(<http://purl.obolibrary.org/obo/MP_0014071> <http://purl.obolibrary.org/obo/MP_0005440>)
SubClassOf(<http://purl.obolibrary.org/obo/MP_0014071> <http://purl.obolibrary.org/obo/MP_0014070>)
SubClassOf(<http://purl.obolibrary.org/obo/MP_0014071> <http://purl.obolibrary.org/obo/MP_0031616>)

# Class: <http://purl.obolibrary.org/obo/MP_0014072> (decreased cardiac muscle glycogen level)

Expand All @@ -149303,8 +149305,8 @@ AnnotationAssertion(<http://www.geneontology.org/formats/oboInOwl#hasExactSynony
AnnotationAssertion(<http://www.geneontology.org/formats/oboInOwl#id> <http://purl.obolibrary.org/obo/MP_0014072> "MP:0014072")
AnnotationAssertion(rdfs:label <http://purl.obolibrary.org/obo/MP_0014072> "decreased cardiac muscle glycogen level")
EquivalentClasses(<http://purl.obolibrary.org/obo/MP_0014072> ObjectSomeValuesFrom(<http://purl.obolibrary.org/obo/BFO_0000051> ObjectIntersectionOf(<http://purl.obolibrary.org/obo/PATO_0001997> ObjectSomeValuesFrom(<http://purl.obolibrary.org/obo/RO_0000052> ObjectIntersectionOf(<http://purl.obolibrary.org/obo/CHEBI_28087> ObjectSomeValuesFrom(<http://purl.obolibrary.org/obo/BFO_0000050> <http://purl.obolibrary.org/obo/UBERON_0001133>))) ObjectSomeValuesFrom(<http://purl.obolibrary.org/obo/RO_0002573> <http://purl.obolibrary.org/obo/PATO_0000460>))))
SubClassOf(<http://purl.obolibrary.org/obo/MP_0014072> <http://purl.obolibrary.org/obo/MP_0005439>)
SubClassOf(<http://purl.obolibrary.org/obo/MP_0014072> <http://purl.obolibrary.org/obo/MP_0014070>)
SubClassOf(<http://purl.obolibrary.org/obo/MP_0014072> <http://purl.obolibrary.org/obo/MP_0031615>)

# Class: <http://purl.obolibrary.org/obo/MP_0014073> (abnormal brain glycogen level)

Expand Down Expand Up @@ -185369,7 +185371,7 @@ AnnotationAssertion(<http://purl.org/dc/terms/contributor> <http://purl.obolibra
AnnotationAssertion(<http://www.geneontology.org/formats/oboInOwl#hasOBONamespace> <http://purl.obolibrary.org/obo/MP_0031412> "MPheno.ontology")
AnnotationAssertion(<http://www.geneontology.org/formats/oboInOwl#id> <http://purl.obolibrary.org/obo/MP_0031412> "MP:0031412")
AnnotationAssertion(rdfs:label <http://purl.obolibrary.org/obo/MP_0031412> "abnormal muscle triglyceride level")
EquivalentClasses(<http://purl.obolibrary.org/obo/MP_0031412> ObjectSomeValuesFrom(<http://purl.obolibrary.org/obo/BFO_0000051> ObjectIntersectionOf(<http://purl.obolibrary.org/obo/PATO_0000070> ObjectSomeValuesFrom(<http://purl.obolibrary.org/obo/RO_0000052> ObjectIntersectionOf(<http://purl.obolibrary.org/obo/CHEBI_17855> ObjectSomeValuesFrom(<http://purl.obolibrary.org/obo/mpath#part_of> <http://purl.obolibrary.org/obo/UBERON_0001630>))) ObjectSomeValuesFrom(<http://purl.obolibrary.org/obo/RO_0002573> <http://purl.obolibrary.org/obo/PATO_0000460>))))
EquivalentClasses(<http://purl.obolibrary.org/obo/MP_0031412> ObjectSomeValuesFrom(<http://purl.obolibrary.org/obo/BFO_0000051> ObjectIntersectionOf(<http://purl.obolibrary.org/obo/PATO_0000070> ObjectSomeValuesFrom(<http://purl.obolibrary.org/obo/RO_0000052> ObjectIntersectionOf(<http://purl.obolibrary.org/obo/CHEBI_17855> ObjectSomeValuesFrom(<http://purl.obolibrary.org/obo/BFO_0000050> <http://purl.obolibrary.org/obo/UBERON_0002385>))) ObjectSomeValuesFrom(<http://purl.obolibrary.org/obo/RO_0002573> <http://purl.obolibrary.org/obo/PATO_0000460>))))
SubClassOf(<http://purl.obolibrary.org/obo/MP_0031412> <http://purl.obolibrary.org/obo/MP_0000187>)
SubClassOf(<http://purl.obolibrary.org/obo/MP_0031412> <http://purl.obolibrary.org/obo/MP_0002108>)

Expand Down Expand Up @@ -188319,6 +188321,32 @@ AnnotationAssertion(rdfs:label <http://purl.obolibrary.org/obo/MP_0031614> "feta
EquivalentClasses(<http://purl.obolibrary.org/obo/MP_0031614> ObjectSomeValuesFrom(<http://purl.obolibrary.org/obo/BFO_0000051> ObjectIntersectionOf(<http://purl.obolibrary.org/obo/PATO_0000941> ObjectSomeValuesFrom(<http://purl.obolibrary.org/obo/RO_0002314> <http://purl.obolibrary.org/obo/CL_0002495>) ObjectSomeValuesFrom(<http://purl.obolibrary.org/obo/RO_0002573> <http://purl.obolibrary.org/obo/PATO_0000460>))))
SubClassOf(<http://purl.obolibrary.org/obo/MP_0031614> <http://purl.obolibrary.org/obo/MP_0008788>)

# Class: <http://purl.obolibrary.org/obo/MP_0031615> (decreased muscle glycogen level)

AnnotationAssertion(Annotation(<http://www.geneontology.org/formats/oboInOwl#hasDbXref> <https://orcid.org/0000-0002-6490-7723>) <http://purl.obolibrary.org/obo/IAO_0000115> <http://purl.obolibrary.org/obo/MP_0031615> "less than the normal concentration of a readily converted carbohydrate reserve in any muscle tissue")
AnnotationAssertion(<http://purl.org/dc/terms/contributor> <http://purl.obolibrary.org/obo/MP_0031615> <https://orcid.org/0000-0002-6490-7723>)
AnnotationAssertion(<http://purl.org/dc/terms/date> <http://purl.obolibrary.org/obo/MP_0031615> "2024-03-11T10:48:09Z"^^xsd:dateTime)
AnnotationAssertion(<http://www.geneontology.org/formats/oboInOwl#hasExactSynonym> <http://purl.obolibrary.org/obo/MP_0031615> "reduced muscle glycogen level")
AnnotationAssertion(<http://www.geneontology.org/formats/oboInOwl#hasOBONamespace> <http://purl.obolibrary.org/obo/MP_0031615> "MPheno.ontology")
AnnotationAssertion(<http://www.geneontology.org/formats/oboInOwl#id> <http://purl.obolibrary.org/obo/MP_0031615> "MP:0031615")
AnnotationAssertion(rdfs:label <http://purl.obolibrary.org/obo/MP_0031615> "decreased muscle glycogen level")
EquivalentClasses(<http://purl.obolibrary.org/obo/MP_0031615> ObjectSomeValuesFrom(<http://purl.obolibrary.org/obo/BFO_0000051> ObjectIntersectionOf(<http://purl.obolibrary.org/obo/PATO_0001997> ObjectSomeValuesFrom(<http://purl.obolibrary.org/obo/RO_0000052> ObjectIntersectionOf(<http://purl.obolibrary.org/obo/CHEBI_28087> ObjectSomeValuesFrom(<http://purl.obolibrary.org/obo/BFO_0000050> <http://purl.obolibrary.org/obo/UBERON_0002385>))) ObjectSomeValuesFrom(<http://purl.obolibrary.org/obo/RO_0002573> <http://purl.obolibrary.org/obo/PATO_0000460>))))
SubClassOf(<http://purl.obolibrary.org/obo/MP_0031615> <http://purl.obolibrary.org/obo/MP_0005439>)
SubClassOf(<http://purl.obolibrary.org/obo/MP_0031615> <http://purl.obolibrary.org/obo/MP_0014068>)

# Class: <http://purl.obolibrary.org/obo/MP_0031616> (increased muscle glycogen level)

AnnotationAssertion(Annotation(<http://www.geneontology.org/formats/oboInOwl#hasDbXref> <https://orcid.org/0000-0002-6490-7723>) <http://purl.obolibrary.org/obo/IAO_0000115> <http://purl.obolibrary.org/obo/MP_0031616> "greater than the normal concentration of a readily converted carbohydrate reserve in any muscle tissue")
AnnotationAssertion(<http://purl.org/dc/terms/contributor> <http://purl.obolibrary.org/obo/MP_0031616> <https://orcid.org/0000-0002-6490-7723>)
AnnotationAssertion(<http://purl.org/dc/terms/date> <http://purl.obolibrary.org/obo/MP_0031616> "2024-03-11T11:07:58Z"^^xsd:dateTime)
AnnotationAssertion(<http://www.geneontology.org/formats/oboInOwl#hasExactSynonym> <http://purl.obolibrary.org/obo/MP_0031616> "elevated muscle glycogen level")
AnnotationAssertion(<http://www.geneontology.org/formats/oboInOwl#hasOBONamespace> <http://purl.obolibrary.org/obo/MP_0031616> "MPheno.ontology")
AnnotationAssertion(<http://www.geneontology.org/formats/oboInOwl#id> <http://purl.obolibrary.org/obo/MP_0031616> "MP:0031616")
AnnotationAssertion(rdfs:label <http://purl.obolibrary.org/obo/MP_0031616> "increased muscle glycogen level")
EquivalentClasses(<http://purl.obolibrary.org/obo/MP_0031616> ObjectSomeValuesFrom(<http://purl.obolibrary.org/obo/BFO_0000051> ObjectIntersectionOf(<http://purl.obolibrary.org/obo/PATO_0000470> ObjectSomeValuesFrom(<http://purl.obolibrary.org/obo/RO_0000052> ObjectIntersectionOf(<http://purl.obolibrary.org/obo/CHEBI_28087> ObjectSomeValuesFrom(<http://purl.obolibrary.org/obo/BFO_0000050> <http://purl.obolibrary.org/obo/UBERON_0002385>))) ObjectSomeValuesFrom(<http://purl.obolibrary.org/obo/RO_0002573> <http://purl.obolibrary.org/obo/PATO_0000460>))))
SubClassOf(<http://purl.obolibrary.org/obo/MP_0031616> <http://purl.obolibrary.org/obo/MP_0005440>)
SubClassOf(<http://purl.obolibrary.org/obo/MP_0031616> <http://purl.obolibrary.org/obo/MP_0014068>)

# Class: <http://purl.obolibrary.org/obo/MP_3000001> (abnormal gastrula morphology)

AnnotationAssertion(Annotation(<http://www.geneontology.org/formats/oboInOwl#hasDbXref> "http://discovery.lifemapsc.com/library/review-of-medical-embryology/chapter-18-week-3-of-development-trilaminar-germ-disk-embryo-formation-and-gastrulation") <http://purl.obolibrary.org/obo/IAO_0000115> <http://purl.obolibrary.org/obo/MP_3000001> "any structural anomaly of the pear shaped trilaminar embryonic stage in which the primititve streak elongates, the epiblast cells migrate medially towards the streak, enter the primitive groove and migrate laterally to organize into the intraembryonic mesoderm (epithelio-mesenchymal transition) between the embryonic ectoderm and primitive endoderm; the notochordal process forms and extends, and the disc becomes pear shaped as the notochordal process grows")
Expand Down

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