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The actual augmentation parameters have issues:
The ElasticTransform parameters makes the image unreadable
ElasticTransform(alpha=64, sigma=25, p=1.0),
The Affine and ShiftScaleRotate options cut the borders and lose informations:
Affine(translate_px=(0, 5), rotate=(-3, 3), shear=(-5, 5), p=1.0)
ShiftScaleRotate(shift_limit=0.0625, scale_limit=0.2, rotate_limit=1, p=0.2) Similar
My suggestions are:
ElasticTransform reduce the alpha parameter to equal/lower than 10 (I suggest the int 7)
Substitute the Affine and ShiftScaleRotate to option SafeRotate, that don't remove any information of the image.