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update pkgdown workflow #3

update pkgdown workflow

update pkgdown workflow #3

Triggered via push June 17, 2024 13:55
Status Failure
Total duration 6h 0m 14s
Artifacts 2

R-CMD-check.yaml

on: push
Matrix: R-CMD-check
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8 errors and 17 warnings
ubuntu-latest (oldrel-1)
Process completed with exit code 1.
macos-latest (release)
R CMD check found WARNINGs
macos-latest (release)
Process completed with exit code 1.
macos-latest (release)
No such keg: /opt/homebrew/Cellar/r
windows-latest (release)
R CMD check found WARNINGs
windows-latest (release)
Process completed with exit code 1.
ubuntu-latest (devel)
The job running on runner GitHub Actions 17 has exceeded the maximum execution time of 360 minutes.
ubuntu-latest (release)
The job running on runner GitHub Actions 19 has exceeded the maximum execution time of 360 minutes.
macos-latest (release)
unable to access index for repository https://bioconductor.org/packages/3.18/bioc/bin/macosx/big-sur-arm64/contrib/4.4:
macos-latest (release)
unable to access index for repository https://bioconductor.org/packages/3.18/data/annotation/bin/macosx/big-sur-arm64/contrib/4.4:
macos-latest (release)
unable to access index for repository https://bioconductor.org/packages/3.18/data/experiment/bin/macosx/big-sur-arm64/contrib/4.4:
macos-latest (release)
unable to access index for repository https://bioconductor.org/packages/3.18/workflows/bin/macosx/big-sur-arm64/contrib/4.4:
macos-latest (release)
unable to access index for repository https://bioconductor.org/packages/3.18/books/bin/macosx/big-sur-arm64/contrib/4.4:
macos-latest (release)
'library' or 'require' call not declared from: 'Matrix'
macos-latest (release)
merge:
macos-latest (release)
Missing link or links in Rd file 'add_hmmcopy.Rd':
macos-latest (release)
Undocumented code objects:
macos-latest (release)
Undocumented arguments in Rd file 'bin_atac_frags.Rd'
macos-latest (release)
pkg-config 0.29.2_3 is already installed and up-to-date. To reinstall 0.29.2_3, run: brew reinstall pkg-config
macos-latest (release)
HOMEBREW_NO_INSTALLED_DEPENDENTS_CHECK is set: not checking for outdated dependents or dependents with broken linkage!
windows-latest (release)
'library' or 'require' call not declared from: 'Matrix'
windows-latest (release)
merge:
windows-latest (release)
Missing link or links in Rd file 'add_hmmcopy.Rd':
windows-latest (release)
Undocumented code objects:
windows-latest (release)
Undocumented arguments in Rd file 'bin_atac_frags.Rd'

Artifacts

Produced during runtime
Name Size
Windows-X64-rrelease-1-results Expired
28.8 MB
macOS-ARM64-rrelease-0-results Expired
29 MB