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renv workflow

renv workflow #1

Triggered via push July 10, 2024 03:09
Status Failure
Total duration 46m 48s
Artifacts
Matrix: R-CMD-check
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24 errors and 11 warnings
ubuntu-latest (release)
error testing if 'RSQLite' can be loaded [error code 1]
ubuntu-latest (release)
Process completed with exit code 1.
ubuntu-20.04 (devel)
Error installing package 'curl':
ubuntu-20.04 (devel)
Process completed with exit code 1.
ubuntu-latest (devel)
Error installing package 'curl':
ubuntu-latest (devel)
Process completed with exit code 1.
ubuntu-22.04 (release)
Error installing package 'Rhtslib':
ubuntu-22.04 (release)
Process completed with exit code 1.
macos-latest (oldrel)
there is no package called ‘rcmdcheck’
macos-latest (oldrel)
Process completed with exit code 1.
macos-latest (oldrel)
No such keg: /opt/homebrew/Cellar/r
ubuntu-20.04 (release)
Error installing package 'Rhtslib':
ubuntu-20.04 (release)
Process completed with exit code 1.
ubuntu-latest (oldrel-1)
error testing if 'RSQLite' can be loaded [error code 1]
ubuntu-latest (oldrel-1)
Process completed with exit code 1.
ubuntu-22.04 (devel)
Error installing package 'curl':
ubuntu-22.04 (devel)
Process completed with exit code 1.
windows-latest (release)
Error installing package 'Rhtslib':
windows-latest (release)
Process completed with exit code 1.
macos-latest (release)
Error installing package 'EnsDb.Hsapiens.v86':
macos-latest (release)
Process completed with exit code 1.
macos-latest (release)
No such keg: /opt/homebrew/Cellar/r
windows-latest (oldrel)
there is no package called 'rcmdcheck'
windows-latest (oldrel)
Process completed with exit code 1.
macos-latest (oldrel)
No files were found with the provided path: /Users/runner/work/scatools/scatools/check. No artifacts will be uploaded.
macos-latest (oldrel)
pkg-config 0.29.2_3 is already installed and up-to-date. To reinstall 0.29.2_3, run: brew reinstall pkg-config
macos-latest (oldrel)
HOMEBREW_NO_INSTALLED_DEPENDENTS_CHECK is set: not checking for outdated dependents or dependents with broken linkage!
macos-latest (release)
unable to access index for repository https://bioconductor.org/packages/3.18/bioc/bin/macosx/big-sur-arm64/contrib/4.4:
macos-latest (release)
unable to access index for repository https://bioconductor.org/packages/3.18/data/annotation/bin/macosx/big-sur-arm64/contrib/4.4:
macos-latest (release)
unable to access index for repository https://bioconductor.org/packages/3.18/data/experiment/bin/macosx/big-sur-arm64/contrib/4.4:
macos-latest (release)
unable to access index for repository https://bioconductor.org/packages/3.18/workflows/bin/macosx/big-sur-arm64/contrib/4.4:
macos-latest (release)
unable to access index for repository https://bioconductor.org/packages/3.18/books/bin/macosx/big-sur-arm64/contrib/4.4:
macos-latest (release)
pkg-config 0.29.2_3 is already installed and up-to-date. To reinstall 0.29.2_3, run: brew reinstall pkg-config
macos-latest (release)
HOMEBREW_NO_INSTALLED_DEPENDENTS_CHECK is set: not checking for outdated dependents or dependents with broken linkage!
windows-latest (oldrel)
No files were found with the provided path: D:/a/scatools/scatools/check. No artifacts will be uploaded.