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Temporary fix for DMP #161

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Temporary fix for DMP #161

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7 changes: 5 additions & 2 deletions api/controllers/UploadController.js
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Original file line number Diff line number Diff line change
Expand Up @@ -170,13 +170,16 @@ exports.grid = [
let formValues = req.body;
let material = formValues.material;
let application = reverseReadableRecipesLib[formValues.application];

if (formValues.application.includes('_') || formValues.application ==='ATAC' || formValues.application === 'PEDPEG') {
application = formValues.application;
}

let cleanedMaterial = material;
// clean up from DMP material choices i.e. DNA (DMP Sample ID only)
if (material.includes('(')) {
cleanedMaterial = 'DNA';
}

let columnsPromise = cache.get(`${material}-${application}-Columns`, () => services.getColumns(cleanedMaterial, application));
Promise.all([columnsPromise])
.then((results) => {
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4 changes: 4 additions & 0 deletions api/util/helpers.js
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Original file line number Diff line number Diff line change
Expand Up @@ -662,6 +662,10 @@ export function submit(submission, user, transactionId) {
return new Promise((resolve, reject) => {
let serviceId = submission.formValues.serviceId;
let recipe = reverseReadableRecipesLib[submission.formValues.application];

if (submission.formValues.application.includes('_') || submission.formValues.application ==='ATAC' || submission.formValues.application === 'PEDPEG') {
recipe = submission.formValues.application;
}
let capturePanel = submission.formValues.capturePanel;
let sampleType = submission.formValues.material;
let seqReadLength = submission.formValues.sequencingReadLength || '';
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