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0.1.0

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@allanbolipata allanbolipata released this 16 Apr 18:26
· 3379 commits to master since this release
0d0c203

CHANGELOG:

make_bam_and_qc.nf script (bwa-mem, samtools view, samtools sort, gatk markduplicates, gatk baserecalibrator, gatk applybqsr)
somatic.nf script (delly call, delly filter, snppileup, facets, manta, strelka, mutect2)
config files for aws and lsf (juno)