CHANGELOG:
#88 - refactor mutect2
#87 - fix tag on gatk docker images
#86 - remove makeSampleFIle process
#83 - added Alfred Dockerfile
#82 - fix permissions for EC2 Role
#69 - vcf2maf
#72 - fix Delly
#77 - change Alfred to do both types of bam QCs
#25 - Fastp and Alfred finalized
