odes test travis upload

.coveragerc

@@ -0,0 +1,6 @@
+[run]
+omit =
+    tensorflow_scientific\quantum\*
+    tensorflow_scientific\solvers\*
+    C:\Users\Mukesh\AppData\Roaming\Python\Python36\*
+    *\__init__.py

.flake8

@@ -0,0 +1,54 @@
+# http://flake8.pycqa.org/en/latest/user/options.html
+# http://flake8.pycqa.org/en/latest/user/error-codes.html
+# http://pycodestyle.readthedocs.io/en/latest/intro.html#error-codes
+
+[flake8]
+
+# Increase the verbosity of Flake8’s output.
+verbose = 0
+# Decrease the verbosity of Flake8’s output.
+# quiet = 0
+
+# Print the total number of errors.
+count = True
+
+# Print the source code generating the error/warning in question.
+show-source = True
+
+# Count the number of occurrences of each error/warning code and print a report.
+statistics = True
+
+# Redirect all output to the specified file.
+output-file = .flake8.log
+
+# Also print output to stdout if output-file has been configured.
+tee = True
+
+# Provide a comma-separated list of glob patterns to exclude from checks.
+exclude =
+    .git,
+    __pycache__,
+    .venv,
+    .tox,
+    dist,
+    doc,
+    build,
+    *.egg
+
+# Provide a comma-separate list of glob patterns to include for checks.
+filename =
+    *.py
+
+# Report all errors, even if it is on the same line as a `# NOQA` comment.
+disable-noqa = False
+
+# Set the maximum length that any line (with some exceptions) may be.
+max-line-length = 120
+
+# Specify a list of codes to ignore.
+ignore =
+    W503,
+    E731
+
+# Enable PyFlakes syntax checking of doctests in docstrings.
+doctests = True

.gitignore

@@ -45,3 +45,8 @@ check.py
 /tensorflow_scientific/solvers
 /tensorflow_scientific/quantum
 .cache
+.pytest_cache
+.*log
+.coverage
+.benchmarks
+.tox

.travis.yml

@@ -0,0 +1,28 @@
+dist: xenial
+language: python
+
+python:
+  - "3.5"
+  - "3.6"
+  - "3.7"
+
+install:
+- python setup.py -q install
+- pip install -r test-requirements.txt
+
+script:
+  - echo "Running Tests ..."
+  - pytest
+  - pytest -v --cov
+  - flake8
+  - coverage run --source=tensorflow_scientific -m pytest
+
+after_success:
+  - coveralls
+
+notifications:
+  email:
+    recipients:
+      - [email protected]
+    on_success: never
+    on_failure: always

pytest.ini

@@ -0,0 +1,3 @@
+[pytest]
+filterwarnings =
+    ignore::DeprecationWarning

setup.cfg

@@ -0,0 +1,2 @@
+[bdist_wheel]
+universal = 1

setup.py

@@ -1,4 +1,4 @@
-# Copyright 2019 The TensorFlow Authors. All Rights Reserved.
+# Copyright 2019, Mukesh Mithrakumar. All Rights Reserved.
 #
 # Licensed under the Apache License, Version 2.0 (the "License");
 # you may not use this file except in compliance with the License.
@@ -24,39 +24,55 @@
 
 from setuptools import find_packages
 from setuptools import setup
+import os
+import sys
+
+# To enable importing version.py directly, we add its path to sys.path.
+version_path = os.path.join(os.path.dirname(__file__), 'tensorflow_scientific')
+sys.path.append(version_path)
+from version import __version__     # noqa: E402
 
 
 project_name = 'tensorflow-scientific'
-project_version = '1.0.0-beta0'
+project_version = '0.1.0-dev'
 
 REQUIRED_PACKAGES = [
     'six >= 1.10.0',
+    'tensorflow==2.0.0-beta0'
 ]
 
+with open('README.md', 'r') as fh:
+    long_description = fh.read()
 
 setup(
     name=project_name,
-    version=project_version.replace('-', ''),
+    version=__version__,
+    description='Scientific modeling in TensorFlow',
+    long_description=long_description,
+    long_description_content_type='text/markdown',
     author='Mukesh Mithrakumar',
-    author_email='[email protected]',
-    packages=find_packages(),
+    author_email='[email protected]',
+    url='https://github.com/mukeshmithrakumar/scientific',
+    packages=find_packages(exclude=['tests']),
     install_requires=REQUIRED_PACKAGES,
     include_package_data=True,
     zip_safe=False,
     classifiers=[
-        'Development Status :: 0 - Alpha',
+        'Development Status :: 3 - Alpha',
         'Intended Audience :: Developers',
         'Intended Audience :: Education',
         'Intended Audience :: Science/Research',
         'License :: OSI Approved :: Apache Software License',
-        'Programming Language :: Python :: 2.7',
-        'Programming Language :: Python :: 3.4',
         'Programming Language :: Python :: 3.5',
         'Programming Language :: Python :: 3.6',
+        'Programming Language :: Python :: 3.7',
         'Topic :: Scientific/Engineering :: Mathematics',
         'Topic :: Software Development :: Libraries :: Python Modules',
         'Topic :: Software Development :: Libraries',
     ],
+    project_urls={
+        'Source': 'https://github.com/mukeshmithrakumar/scientific'
+    },
     license='Apache 2.0',
-    keywords='tensorflow scientific',
+    keywords=('tensorflow', 'scientific')
 )

tensorflow_scientific/__init__.py

@@ -0,0 +1,22 @@
+# Copyright 2019, The TensorFlow Scientific Authors. All Rights Reserved.
+#
+# Licensed under the Apache License, Version 2.0 (the "License");
+# you may not use this file except in compliance with the License.
+# You may obtain a copy of the License at
+#
+#     http://www.apache.org/licenses/LICENSE-2.0
+#
+# Unless required by applicable law or agreed to in writing, software
+# distributed under the License is distributed on an "AS IS" BASIS,
+# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+# See the License for the specific language governing permissions and
+# limitations under the License.
+# ==============================================================================
+"""A scientific extension for TensorFlow."""
+
+from __future__ import absolute_import
+from __future__ import division
+from __future__ import print_function
+
+# flake8: noqa: F401
+from tensorflow_scientific.integrate import odes

tensorflow_scientific/integrate/__init__.py

@@ -1,4 +1,4 @@
-# Copyright 2019 The TensorFlow Authors. All Rights Reserved.
+# Copyright 2019, Mukesh Mithrakumar. All Rights Reserved.
 #
 # Licensed under the Apache License, Version 2.0 (the "License");
 # you may not use this file except in compliance with the License.
@@ -12,10 +12,11 @@
 # See the License for the specific language governing permissions and
 # limitations under the License.
 # ==============================================================================
-"""A module containing Integration and ODE solvers for TensorFlow."""
+"""Integration and ODE solver."""
 
 from __future__ import absolute_import
 from __future__ import division
 from __future__ import print_function
 
-# flake8: noqa
+# flake8: noqa : F403, F401
+from tensorflow_scientific.integrate.odes import *