Release 0.0.15

Full Changelog: 0.0.14...0.0.15

Removing Ray @mwang87

Release 0.0.14

What's Changed

• Cleaning up Release Drafter by @mwang87 in #211
• User Settable Max File Size in Workflow by @mwang87 in #214
• Add language == "japanese" by @kozo2 in #215
• Adding Japanese Translation by @mwang87 in #216
• Update to make Japanese more natural by @kozo2 in #217
• [Translation] Making translations more complete by @mwang87 in #218
• adding more testing for cardinality by @mwang87 in #221
• Using latest version of lark by @mwang87 in #200
• [Compendium] Refactor for compendium by @mwang87 in #219
• Update README.md by @Adafede in #227
• Copy dataframe when applying intensity match by @JohnsonDylan in #226
• Update msql_translator.py by @Adafede in #228
• Update msql_translator.py by @Adafede in #229
• Adding Another Lanuage by @mwang87 in #231
• Fixes for merging by @mwang87 in #230
• Removing Ray Dependencies by @mwang87 in #232

New Contributors

• @kozo2 made their first contribution in #215
• @Adafede made their first contribution in #227
• @JohnsonDylan made their first contribution in #226

Full Changelog: 0.0.12...0.0.14

Release 0.0.12

What's Changed

• [Bug Fix] MassQL MGF Scan number types by @mwang87 in #206
• [Testing] Fixing testing - scan numbers are integers by @mwang87 in #207
• Add test setup info to README and minore .gitignore update by @dvryaboy in #209
• Tea Examples - Address UV spectra in mzML by @mwang87 in #210
• Tolerating Failures on Cluster by @mwang87 in #208

New Contributors

• @dvryaboy made their first contribution in #209

Full Changelog: 0.0.11...0.0.12

Release 0.0.11

What's Changed

• Fixing Russian Translation by @sarvarkaxxorov in #194
• Exporting original filename by @mwang87 in #195
• [Grammar] Cardinality support for OR operations by @mwang87 in #198
• MassQL File Loading Extraction Fix by @mwang87 in #202
• Bug Fix - If output filename for results is too long, force it shorter by @mwang87 in #204

New Contributors

• @sarvarkaxxorov made their first contribution in #194

Full Changelog: 0.0.10...0.0.11

Release 0.0.10

Change Log

• [Language Feature] Adding support for scan intensity max (#191) @mwang87
• [Engine] Updating the extraction when there are UV spectra (#190) @mwang87
• [Engine] Fixing defect when it is not ANY mass (#184) @mwang87
• [Engine] More properly implementing the mass defect filtering (#183) @mwang87
• [Extraction] Enabling Extraction of JSON files from GNPS Libraries (#179) @mwang87
• [Translator] Updating Translate with OR (#178) @mwang87
• [Translator] Updating translator feature (#176) @mwang87
• [Workflow] Exporting JSON to be more scalable (#174) @mwang87
• [Workflow] Recursive merge for scalability (#175) @mwang87
• [Testing] Adding testing for brominated compounds (#182) @mwang87

Release 0.0.9

Change Log

• [Workflow] Creating new Environment docs (#172) @mwang87
• [Workflow] Increasing Scalability (#161) @mwang87
• [Workflow] Add XMX options (#171) @mwang87
• [Language/Engine] Negation (#173) @mwang87
• [Language/Engine] Mass Defect Rename and Update ANY keyword (#167) @mwang87
• [Dash] Revamp (#169) @mwang87
• [Cluster Scheduling] Enabling Resume (#168) @mwang87
• [Refactor] Using pyteomics natively to get the CV for the unit (#155) @mwang87
• [ProteoSAFe] Linkout to Falcon (#154) @mwang87

Release 0.0.8

Change Log

• Mobility Variables in Min/Max (#153) @mwang87

Release 0.0.7

Change Log

• [Grammar/Engine] Mobility Support (#150) @mwang87
• [Packaging] Updating the packages of massql commandline (#151) @mwang87

Release 0.0.6

Change Log

• [Engine] Creating new API and docs for file loading and calling query (#146) @mwang87
• [Testing] Integration Testing (#145) @mwang87
• [Testing] Update Integration testing (#144) @mwang87
• [Grammar/Engine] Enabling OR operations (#143) @mwang87
• [Bug Fix] Adding maldi testing and early exit without nasty message (#141) @mwang87
• [Testing] Adding Case sensitivity testing (#140) @mwang87
• [Testing] Enhancing Testing and Bug Fix for Visualizer (#139) @mwang87
• [Grammar] Removing Case Sensitivity for some keywords (#138) @mwang87

Release 0.0.5

Change Log

• Release Drafter (#137) @mwang87
• Package Reorganization (#136) @mwang87
• showing visualization for parser (#132) @mwang87
• [Top Down] Bug Fix for when no peaks are filtered (#135) @mwang87
• Implementing Mass Defect (#133) @mwang87
• Tolerate file format (#130) @mwang87
• Enabling synonyms in Query language (#129) @mwang87
• Using mzML for all plotting (#128) @mwang87
• Extraction Bug Fix (#127) @mwang87
• Adding top down test (#120) @mwang87
• Internationalization (#123) @mwang87
• Translation (#49) @mwang87
• making sure i_norm is in output (#118) @mwang87
• Visualization API (#115) @mwang87
• Bug fix to 2d plots (#114) @mwang87
• Extract efficient (#113) @mwang87
• updating visualizer and translator for x range (#112) @mwang87
• Enabling Language to Specify Ranges for X (#111) @mwang87
• Updating Column Order and type (#105) @mwang87
• ProteSAFe Runtime Trace (#103) @mwang87
• Adding arrows in visualizer (#102) @mwang87
• [WIP] Speed Increase for Data Loading (#100) @mwang87
• Setting ceiling for min intensity percentage (#97) @mwang87
• Adding visualizer for minimum intensity (#96) @mwang87
• Fixing Visualizer Issues with hovers and displays (#93) @mwang87
• Dash App bug fixes (#86) @mwang87
• Histogram for MS2 peaks (#83) @mwang87
• Implementing complex queries when variables are present (#79) @mwang87
• Workflow Testing To prevent NextFlow Errors (#78) @mwang87
• merge (#76) @mwang87
• [WIP] Complex variables with formulas (#63) @mwang87
• Advanced parse testing with reference parses (#74) @mwang87
• merge (#65) @mwang87
• [WIP] Adjusting tests for Formulas (#64) @mwang87
• Peptide calculations (#62) @mwang87
• Formula Calculations (#61) @mwang87
• Numeric Expressions to calcualte peak m/z (#60) @mwang87
• Summarization Data Science-y plots (#53) @mwang87
• Adding comments into the language (#58) @mwang87
• Fixing extraction bugs (#57) @mwang87
• Cleaning up random indexes that might get injected (#54) @mwang87
• Enabling merging multiple queries (#51) @mwang87
• [WIP] English Translator (#48) @mwang87
• All Caps transformation (#47) @mwang87
• TIC Minimum in Language (#45) @mwang87
• Adding Support for Charge State (#41) @mwang87
• Supporting scan ranges (#40) @mwang87
• Polarity (#38) @mwang87
• Same filename fix (#29) @mwang87
• Memory optimization for engine (#25) @mwang87
• Visualizations for Queries (#26) @mwang87
• Reorg Parallel (#22) @mwang87
• Supporting Query in Nextflow (#16) @mwang87
• MGF Export in Workflow (#10) @mwang87
• V2 (#9) @mwang87
• Correct variable mass (#8) @mwang87
• Add precursor scan examples (#7) @XsirdanielX
• Recursive query (#2) @mwang87