doc_label

src/tool.py

@@ -315,6 +315,13 @@ def build_single_fit_ui(self, layout):
         row = QHBoxLayout()
         layout.addLayout(row)
 
+        doc_label = QLabel("Fit a single atomic model to a map interactively.")
+        doc_label.setWordWrap(True)
+        row.addWidget(doc_label)
+
+        row = QHBoxLayout()
+        layout.addLayout(row)
+
         mol_label = QLabel("Fit")
         row.addWidget(mol_label)
 
@@ -493,6 +500,16 @@ def _show_or_hide_options(self):
 
     def build_compute_ui(self, layout):
         row = 0
+
+        doc_label = QLabel("Fit <b>multiple</b> atomic models to a map by specifying the file paths.\n"
+                           "The number of models can be up to hundreds to thousands, limited by the available device memory.\n"
+                           "You may change the device in use from the Device tab.\n"
+                           "Check the doc and tutorial videos for how to set the parameters, especially the \"Sim-map Folder\".\n"
+                           "You may also run this tab's functionality by a Python command independently from ChimeraX "
+                           "on a supercomputer and then view the results in the View tab.")
+        doc_label.setWordWrap(True)
+        layout.addWidget(doc_label, row, 0, 1, 3)
+        row = row + 1
 
         target_vol_path_label = QLabel()
         target_vol_path_label.setText("Target Volume:")
@@ -521,7 +538,7 @@ def build_compute_ui(self, layout):
         self.structures_sim_map_dir = QLineEdit()
         self.structures_sim_map_dir.textChanged.connect(lambda: self.store_settings())   
         structures_sim_map_dir_select = QPushButton("Select")        
-        structures_sim_map_dir_select.clicked.connect(lambda: self.select_clicked("Structures sim-map Folder", self.structures_sim_map_dir))
+        structures_sim_map_dir_select.clicked.connect(lambda: self.select_clicked("Structures Sim-map Folder", self.structures_sim_map_dir))
         layout.addWidget(structures_sim_map_dir_label, row, 0)
         layout.addWidget(self.structures_sim_map_dir, row, 1)
         layout.addWidget(structures_sim_map_dir_select, row, 2)
@@ -539,7 +556,7 @@ def build_compute_ui(self, layout):
         row = row + 1
 
         target_surface_threshold_label = QLabel()
-        target_surface_threshold_label.setText("Target surface threshold:")
+        target_surface_threshold_label.setText("Target Surface Threshold:")
         self.target_surface_threshold = QDoubleSpinBox()
         self.target_surface_threshold.setMinimum(0.0)
         self.target_surface_threshold.setMaximum(20.0)
@@ -558,6 +575,11 @@ def build_compute_ui(self, layout):
 
         # advanced
         # TODO:
+
+        doc_label = QLabel("Usually, you don't have to touch the parameters below.")
+        doc_label.setWordWrap(True)
+        layout.addWidget(doc_label, row, 0, 1, 3)
+        row = row + 1
 
         min_cluster_size_label = QLabel()
         min_cluster_size_label.setText("Min island size:")