Update requirements.R #75
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# This is a basic workflow to help you get started with Actions | |
name: Ubuntu R | |
# Controls when the workflow will run | |
on: | |
# Triggers the workflow on push or pull request events but only for the main | |
# branch | |
push: | |
branches: [ main ] | |
pull_request: | |
branches: [ main ] | |
# Allows you to run this workflow manually from the Actions tab | |
workflow_dispatch: | |
# A workflow run is made up of one or more jobs that can run sequentially or in | |
# parallel | |
jobs: | |
# This workflow contains a single job called "build" | |
build: | |
# The type of runner that the job will run on | |
runs-on: ubuntu-latest | |
strategy: | |
matrix: | |
r-version: ['3.6.3', '4.2.1'] | |
# Steps represent a sequence of tasks that will be executed as part of the | |
# job | |
steps: | |
- uses: actions/checkout@v2 | |
- uses: conda-incubator/setup-miniconda@v2 | |
with: | |
activate-environment: test | |
python-version: 3.8 | |
auto-activate-base: false | |
- name: install system dependencies | |
shell: bash | |
run: | | |
sudo apt-get update -y | |
sudo apt-get install -y wget git gawk findutils | |
xargs -a <(awk '! /^ *(#|$)/' ".github/workflows/apt.txt") -r -- \ | |
sudo apt-get install -y --no-install-recommends --no-install-suggests | |
# Steps to install R dependencies | |
- uses: actions/checkout@v3 | |
- name: Set up R ${{ matrix.r-version }} | |
uses: r-lib/actions/setup-r@v2 | |
with: | |
r-version: ${{ matrix.r-version }} | |
- name: Install dependencies | |
run: | | |
./requirements/requirements.R | |
shell: bash | |
- name: Load package and run test | |
run: | | |
devtools::test() | |
shell: Rscript {0} | |