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 ScRNAbox is a single-cell RNA sequencing (scRNAseq) pipeline specifically designed for analyzing data under a High-Performance Computing (HPC) systems using the [Slurm Workload Manager](https://slurm.schedmd.com/). The scRNAbox pipeline incorporates eight analytical steps into a comprehensive scRNAseq analysis that provides the foundation for further investigations. The eight analytical steps are outlined below. 
 
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 The scRNAbox pipeline provides two distinct, yet highly comparable analysis tracks: