Skip to content

Commit

Permalink
Update test_code_Step1_hto.sh
Browse files Browse the repository at this point in the history
  • Loading branch information
fiorini9 authored Oct 4, 2023
1 parent 56cfbf6 commit 2e4bb98
Showing 1 changed file with 3 additions and 4 deletions.
7 changes: 3 additions & 4 deletions test/test_code/test_code_Step1_hto.sh
Original file line number Diff line number Diff line change
@@ -1,9 +1,8 @@
cd /lustre04/scratch/fiorini9/scrna_pipeline/hto_v1.39/pipeline
cd /lustre04/scratch/fiorini9/scrna_pipeline/test_code/pipeline_hto

export SCRNABOX_HOME=/lustre04/scratch/fiorini9/scrna_pipeline/standard_v1.39/scrnabox0/scrnabox/scrnabox.slurm
export SCRNABOX_PWD=/lustre04/scratch/fiorini9/scrna_pipeline/hto_v1.39/pipeline
export SCRNABOX_HOME=/lustre04/scratch/fiorini9/scrna_pipeline/test_code/scrnabox0/scrnabox/scrnabox.slurm
export SCRNABOX_PWD=/lustre04/scratch/fiorini9/scrna_pipeline/test_code/pipeline_hto

bash $SCRNABOX_HOME/launch_scrnabox.sh \
-d ${SCRNABOX_PWD} \
--steps 1

0 comments on commit 2e4bb98

Please sign in to comment.