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VariantAlert

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VariantAlert is a free service that annotates variants provided by the user using multiple variant annotation databases.

To keep users informed about updates, the annotation is repeated daily and if a change is detected the user is notified by email.

For more details, please see About section.

VariantAlert is developed and is hosted by CRS4, Italy.

Requirements

Docker

See docker-compose docs

VariantAlert Handbook

VariantAlert documentation can be found in the docs/ directory:

  1. Quickstart
  2. User Manual

How to cite VariantAlert

To reference VariantAlert in your work, please cite:

Atzeni, R., Massidda, M., Fotia, G., & Uva, P. (2022). VariantAlert: A web-based tool to notify updates in genetic variant annotations. Human Mutation, 1– 8. https://doi.org/10.1002/humu.24495