Pin pillow version and query conda for its base directory.

Thanks: Leon Hafner
nf-core · Feb 1, 2025 · ba2ddda · ba2ddda
1 parent 081ce6c
commit ba2ddda
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diff --git a/modules/nf-core/last/dotplot/environment.yml b/modules/nf-core/last/dotplot/environment.yml
@@ -3,4 +3,5 @@ channels:
   - bioconda
 
 dependencies:
+  - conda-forge::pillow=11.1.0
   - bioconda::last=1608
diff --git a/modules/nf-core/last/dotplot/main.nf b/modules/nf-core/last/dotplot/main.nf
@@ -26,8 +26,9 @@ process LAST_DOTPLOT {
     def annot_a_arg = annot_a ? "-a ${annot_a}" : ''
     def annot_b_arg = annot_b ? "-b ${annot_b}" : ''
     """
+    CONDA_BASE=\$(conda info --base)
     last-dotplot \\
-        -f /opt/conda/pkgs/pillow-11.1.0-py313h8db990d_0/info/test/Tests/fonts/FreeMono.ttf \\
+        -f \${CONDA_BASE}/pkgs/pillow-11.1.0-py313h8db990d_0/info/test/Tests/fonts/FreeMono.ttf \\
         $args \\
         $annot_a_arg \\
         $annot_b_arg \\