Merge pull request #148 from nf-core/fix/multiqc

also put DRAW into MultiQC report
nf-core · Aug 23, 2023 · c06ddc5 · c06ddc5
2 parents cefbdde + d1f0eec
commit c06ddc5
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diff --git a/assets/multiqc_config.yml b/assets/multiqc_config.yml
@@ -52,8 +52,6 @@ sp:
     fn: "*viz_depth_multiqc.png"
   odgi_viz_uncalled:
     fn: "*viz_uncalled_multiqc.png"
-  testing_name:
-    fn: "*draw.png"
 ignore_images: false
 
 # Make the custom content stuff come after the ODGI module output

diff --git a/workflows/pangenome.nf b/workflows/pangenome.nf
@@ -159,7 +159,7 @@ workflow PANGENOME {
     ch_multiqc_files = ch_multiqc_files.mix(CUSTOM_DUMPSOFTWAREVERSIONS.out.mqc_yml.collect())
     if (!params.communities) {
         if (!params.wfmash_only) {
-            ch_multiqc_files = ch_multiqc_files.mix(PGGB.out.qc.map{return it[1..8]})
+            ch_multiqc_files = ch_multiqc_files.mix(PGGB.out.qc.map{return it[1..9]})
         }
     } else {
         ch_multiqc_files = ch_multiqc_files.mix(ODGI_QC.out.qc.map{return it[1..8]})