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also put DRAW into MultiQC report #148

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merged 1 commit into from
Aug 23, 2023
Merged

also put DRAW into MultiQC report #148

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2 changes: 0 additions & 2 deletions assets/multiqc_config.yml
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Original file line number Diff line number Diff line change
Expand Up @@ -52,8 +52,6 @@ sp:
fn: "*viz_depth_multiqc.png"
odgi_viz_uncalled:
fn: "*viz_uncalled_multiqc.png"
testing_name:
fn: "*draw.png"
ignore_images: false

# Make the custom content stuff come after the ODGI module output
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2 changes: 1 addition & 1 deletion workflows/pangenome.nf
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Expand Up @@ -159,7 +159,7 @@ workflow PANGENOME {
ch_multiqc_files = ch_multiqc_files.mix(CUSTOM_DUMPSOFTWAREVERSIONS.out.mqc_yml.collect())
if (!params.communities) {
if (!params.wfmash_only) {
ch_multiqc_files = ch_multiqc_files.mix(PGGB.out.qc.map{return it[1..8]})
ch_multiqc_files = ch_multiqc_files.mix(PGGB.out.qc.map{return it[1..9]})
}
} else {
ch_multiqc_files = ch_multiqc_files.mix(ODGI_QC.out.qc.map{return it[1..8]})
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