ch_fasta_fai and ch_gtf fix after nf-core/tools v2.14.1 merge #332

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Triggered via pull request June 26, 2024 22:00

opened #149

nschcolnicov:dev

Status Success

Total duration 14m 20s

Artifacts –

ci.yml

on: pull_request

Matrix: Run pipeline with test data

Annotations

20 warnings

Run pipeline with test data (latest-everything, skipbasecalib)

Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/setup-python@v2. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.

Run pipeline with test data (latest-everything, skipbasecalib)

The following actions uses node12 which is deprecated and will be forced to run on node16: actions/setup-python@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/

Run pipeline with test data (23.04.0, skipbasecalib)

Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/setup-python@v2. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.

Run pipeline with test data (23.04.0, skipbasecalib)

The following actions uses node12 which is deprecated and will be forced to run on node16: actions/setup-python@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/

Run pipeline with test data (latest-everything, removeduplicates)

Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/setup-python@v2. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.

Run pipeline with test data (latest-everything, removeduplicates)

The following actions uses node12 which is deprecated and will be forced to run on node16: actions/setup-python@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/

Run pipeline with test data (23.04.0, default)

Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/setup-python@v2. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.

Run pipeline with test data (23.04.0, default)

The following actions uses node12 which is deprecated and will be forced to run on node16: actions/setup-python@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/

Run pipeline with test data (23.04.0, bamcsiindex)

Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/setup-python@v2. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.

Run pipeline with test data (23.04.0, bamcsiindex)

The following actions uses node12 which is deprecated and will be forced to run on node16: actions/setup-python@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/

Run pipeline with test data (23.04.0, removeduplicates)

Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/setup-python@v2. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.

Run pipeline with test data (23.04.0, removeduplicates)

The following actions uses node12 which is deprecated and will be forced to run on node16: actions/setup-python@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/

Run pipeline with test data (23.04.0, annotation)

Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/setup-python@v2. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.

Run pipeline with test data (23.04.0, annotation)

The following actions uses node12 which is deprecated and will be forced to run on node16: actions/setup-python@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/

Run pipeline with test data (latest-everything, annotation)

Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/setup-python@v2. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.

Run pipeline with test data (latest-everything, annotation)

The following actions uses node12 which is deprecated and will be forced to run on node16: actions/setup-python@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/

Run pipeline with test data (latest-everything, default)

Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/setup-python@v2. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.

Run pipeline with test data (latest-everything, default)

The following actions uses node12 which is deprecated and will be forced to run on node16: actions/setup-python@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/

Run pipeline with test data (latest-everything, bamcsiindex)

Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/setup-python@v2. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.

Run pipeline with test data (latest-everything, bamcsiindex)

The following actions uses node12 which is deprecated and will be forced to run on node16: actions/setup-python@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/