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Use spatialdata #181

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Use spatialdata

Use spatialdata #181

Triggered via pull request January 31, 2024 10:24
@cavenelcavenel
synchronize #67
use-spatialdata
Status Failure
Total duration 46m 19s
Artifacts –

ci.yml

on: pull_request
Choose nextflow versions to test against depending on target branch
0s
Choose nextflow versions to test against depending on target branch
Matrix: Run pipeline with test data
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6 errors and 3 warnings
Run pipeline with test data (latest-everything, tests/pipeline/test_downstream.nf.test)
Process completed with exit code 1.
Run pipeline with test data (latest-everything, tests/pipeline/test_downstream.nf.test)
Process completed with exit code 1.
Run pipeline with test data (latest-everything, tests/pipeline/test_spaceranger_ffpe_v2_cytassist...
Process completed with exit code 1.
Run pipeline with test data (latest-everything, tests/pipeline/test_spaceranger_ffpe_v2_cytassist...
Process completed with exit code 1.
Run pipeline with test data (latest-everything, tests/pipeline/test_spaceranger_ffpe_v1.nf.test)
Process completed with exit code 1.
Run pipeline with test data (latest-everything, tests/pipeline/test_spaceranger_ffpe_v1.nf.test)
Process completed with exit code 1.
Run pipeline with test data (latest-everything, tests/pipeline/test_downstream.nf.test)
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: nf-core/setup-nextflow@v1. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
Run pipeline with test data (latest-everything, tests/pipeline/test_spaceranger_ffpe_v2_cytassist...
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: nf-core/setup-nextflow@v1. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
Run pipeline with test data (latest-everything, tests/pipeline/test_spaceranger_ffpe_v1.nf.test)
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: nf-core/setup-nextflow@v1. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.