removed numpy build dependency #78
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| name: MGSIM | |
| on: | |
| push: | |
| branches: [ master ] | |
| pull_request: | |
| branches: [ master ] | |
| jobs: | |
| build: | |
| name: build (${{ matrix.python-version }}, ${{ matrix.os }}) | |
| runs-on: ubuntu-latest | |
| defaults: | |
| run: | |
| shell: bash -l {0} | |
| strategy: | |
| matrix: | |
| python-version: [3.9] | |
| steps: | |
| - uses: actions/checkout@v2 | |
| - uses: conda-incubator/setup-miniconda@v2 | |
| with: | |
| miniconda-version: 'latest' | |
| auto-update-conda: true | |
| python-version: ${{ matrix.python-version }} | |
| environment-file: environment.yml | |
| channels: conda-forge,bioconda | |
| activate-environment: mgsim | |
| - name: package install | |
| run: | | |
| python -m pip install --upgrade pip | |
| pip install pytest pytest-dependency pytest-console-scripts | |
| python setup.py install | |
| - name: Test with pytest | |
| run: | | |
| pytest -s --script-launch-mode=subprocess | |
| MGSIM -h |