Merge pull request #427 from nipreps/fix/broken-docs-build-2

FIX: Pandoc requires Texlive to render LaTeX in notebook
nipreps · Jan 18, 2024 · 2db0774 · 2db0774
2 parents 6c5292c + b3c28a4
commit 2db0774
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Showing 2 changed files with 4 additions and 3 deletions.
diff --git a/.circleci/config.yml b/.circleci/config.yml
@@ -370,7 +370,7 @@ jobs:
           name: Install Graphviz & pandoc
           command: |
             sudo apt-get update -y
-            sudo apt-get install -y --no-install-recommends graphviz pandoc
+            sudo apt-get install -y --no-install-recommends graphviz pandoc texlive
       - run:
           name: Install deps
           command: |
@@ -384,7 +384,8 @@ jobs:
             source /tmp/venv/bin/activate
             python -m hatch version | tail -n1 | xargs
             BRANCH=$( echo $CIRCLE_BRANCH | sed 's+/+_+g' )
-            make -C docs SPHINXOPTS="-W" BUILDDIR="$HOME/docs" OUTDIR=${CIRCLE_TAG:-$BRANCH} html
+            python -c "from templateflow.api import get; get('MNI152NLin2009cAsym', desc='brain', resolution=1, suffix='T1w')"
+            make -C docs SPHINXOPTS="-W -v" BUILDDIR="$HOME/docs" OUTDIR=${CIRCLE_TAG:-$BRANCH} html
       - store_artifacts:
           path: ~/docs/
 

diff --git a/docs/notebooks/SDC - Theory and physics.ipynb b/docs/notebooks/SDC - Theory and physics.ipynb
@@ -142,7 +142,7 @@
    "metadata": {},
    "outputs": [],
    "source": [
-    "data = np.asanyarray(nb.load(get(\"MNI152NLin2009cAsym\", desc=\"brain\", resolution=1, suffix=\"T1w\")).dataobj)"
+    "data = np.asanyarray(nb.load(get(\"MNI152NLin2009cAsym\", desc=\"brain\", resolution=1, suffix=\"T1w\")).dataobj);"
    ]
   },
   {