Add full local setup with docker

Dockerfile

@@ -0,0 +1,15 @@
+FROM python:3.7
+
+RUN apt-get update && apt-get install -y postgresql libpq-dev && \
+    pip install --upgrade pip setuptools wheel
+
+ENV PYTHONDONTWRITEBYTECODE=1
+ENV PYTHONUNBUFFERED=1
+
+WORKDIR /code
+
+COPY . requirements.txt app.py manage.py wsgi.py /code/
+
+RUN pip install -r requirements.txt
+
+CMD python manage.py migrate && python app.py

README.md

@@ -74,6 +74,20 @@ While it is possible to run your development environment inside of the system Py
     ```
     I usually store it at `private/environment.sh`.  Load up these environment variables by running `source private/environment.sh` at the Bash prompt.
 
+#### MacOS Install 
+
+1. `brew update; brew install postgresql`
+2. `pip install --upgrade pip setuptools wheel`
+3. `pip install -r requirements.txt`
+4. Create a file for your environment variables that contains at least these:
+    ```
+    export DOMAIN_NAME="localhost://8080"
+    export FLASK_SECRET_KEY="asdf"
+    export S3_BUCKET="a"
+    export SYSADMIN_EMAILS="sysadmin@localhost"
+    ```
+    I usually store it at `private/environment.sh`.  Load up these environment variables by running `source private/environment.sh` at the Bash prompt.
+
 For additional tips on running a local development enironment please see [this wiki page](https://github.com/onnela-lab/beiwe-backend/wiki/Tips-For-Local-Beiwe-Development).  If you are having difficulty getting started, or believe you could assist with any issues of documentation, please [post an issue with a documentation tag](https://github.com/onnela-lab/beiwe-backend/labels/documentation).
 
 ### Local Celery setup
@@ -93,7 +107,7 @@ For those souls brave enough to run the entire broker queue and Celery task disp
 2. `pip install -r requirements_data_processing.txt` (this will install Celery using pip)
 3. Create a file called `manager_ip` in the top level of your `beiwe-backend` repo, and enter these two lines in it.  Do not provide a trailing new-line character.
     ```
-    127.0.0.1:50000
+    mq:50000
     [YOUR DESIRED PASSWORD]
     ```
     Where the password is the one you set when setting up RabbitMQ

config/settings.py

@@ -26,6 +26,7 @@
 
 # The name of the S3 bucket that will be used to store user generated data.
 S3_BUCKET = getenv("S3_BUCKET")
+S3_ENDPOINT = getenv("S3_ENDPOINT", None)
 
 # Domain name for the server, this is used for various details, and should be match the address of
 #  the frontend server.

docker-compose.yml

@@ -0,0 +1,30 @@
+version: "3.8"
+services:
+#  db:
+#    image: "postgresql:14"
+  mq:
+    image: "rabbitmq:latest"
+    environment:
+      - RABBITMQ_DEFAULT_USER=beiwe
+      - RABBITMQ_DEFAULT_PASS=beiwe
+      - RABBITMQ_ERLANG_COOKIE='takeMyCookies'
+  storage:
+    image: minio/minio
+    environment:
+      - MINIO_ACCESS_KEY=minioadmin
+      - MINIO_SECRET_KEY=minioadmin
+    ports:
+      - "9000:9000"
+    command: server /data
+  backend:
+    build: .
+    environment:
+      - DOMAIN_NAME=localhost://8080
+      - FLASK_SECRET_KEY=asdf
+      - S3_BUCKET=beiwe
+      - S3_ENDPOINT=http://storage:9000
+      - SYSADMIN_EMAILS=sysadmin@localhost
+      - BEIWE_SERVER_AWS_ACCESS_KEY_ID=minioadmin
+      - BEIWE_SERVER_AWS_SECRET_ACCESS_KEY=minioadmin
+    ports:
+      - "8080:8080"

libs/s3.py

@@ -2,7 +2,7 @@
 import Crypto
 
 from config.settings import (BEIWE_SERVER_AWS_ACCESS_KEY_ID, BEIWE_SERVER_AWS_SECRET_ACCESS_KEY,
-    S3_BUCKET, S3_REGION_NAME)
+    S3_BUCKET, S3_REGION_NAME, S3_ENDPOINT)
 from libs.encryption import (decrypt_server, encrypt_for_server, generate_key_pairing,
     get_RSA_cipher, prepare_X509_key_for_java)
 
@@ -31,7 +31,8 @@ class NoSuchKeyException(Exception): pass
     's3',
     aws_access_key_id=BEIWE_SERVER_AWS_ACCESS_KEY_ID,
     aws_secret_access_key=BEIWE_SERVER_AWS_SECRET_ACCESS_KEY,
-    region_name=S3_REGION_NAME
+    region_name=S3_REGION_NAME,
+    endpoint_url=S3_ENDPOINT
 )