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* Add support for NEON AOP data * Add NEON AOP spectral signatures * Add NEON demo to docs
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| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -0,0 +1,125 @@ | ||
| { | ||
| "cells": [ | ||
| { | ||
| "cell_type": "markdown", | ||
| "metadata": {}, | ||
| "source": [ | ||
| "[](https://colab.research.google.com/github/opengeos/HyperCoast/blob/main/docs/examples/neon.ipynb)\n", | ||
| "\n", | ||
| "# Visualizing NEON AOP hyperspectral data interactively with HyperCoast\n", | ||
| "\n", | ||
| "This notebook demonstrates how to visualize [NEON AOP](https://data.neonscience.org/data-products/DP3.30006.001) hyperspectral data interactively with HyperCoast." | ||
| ] | ||
| }, | ||
| { | ||
| "cell_type": "code", | ||
| "execution_count": null, | ||
| "metadata": {}, | ||
| "outputs": [], | ||
| "source": [ | ||
| "# %pip install \"hypercoast[extra]\"" | ||
| ] | ||
| }, | ||
| { | ||
| "cell_type": "code", | ||
| "execution_count": null, | ||
| "metadata": {}, | ||
| "outputs": [], | ||
| "source": [ | ||
| "import hypercoast" | ||
| ] | ||
| }, | ||
| { | ||
| "cell_type": "code", | ||
| "execution_count": null, | ||
| "metadata": {}, | ||
| "outputs": [], | ||
| "source": [ | ||
| "url = \"https://github.com/opengeos/datasets/releases/download/hypercoast/NEON_D02_SERC_DP3_368000_4306000_reflectance.h5\"\n", | ||
| "filepath = \"data/neon.h5\"\n", | ||
| "hypercoast.download_file(url, filepath)" | ||
| ] | ||
| }, | ||
| { | ||
| "cell_type": "markdown", | ||
| "metadata": {}, | ||
| "source": [ | ||
| "Load the dataset as a `xarray.Dataset` object." | ||
| ] | ||
| }, | ||
| { | ||
| "cell_type": "code", | ||
| "execution_count": null, | ||
| "metadata": {}, | ||
| "outputs": [], | ||
| "source": [ | ||
| "dataset = hypercoast.read_neon(filepath)\n", | ||
| "dataset" | ||
| ] | ||
| }, | ||
| { | ||
| "cell_type": "markdown", | ||
| "metadata": {}, | ||
| "source": [ | ||
| "Visualize the data interactively with HyperCoast." | ||
| ] | ||
| }, | ||
| { | ||
| "cell_type": "code", | ||
| "execution_count": null, | ||
| "metadata": {}, | ||
| "outputs": [], | ||
| "source": [ | ||
| "m = hypercoast.Map()\n", | ||
| "m.add_neon(filepath, wavelengths=[1000, 700, 500], vmin=0, vmax=0.5)\n", | ||
| "m" | ||
| ] | ||
| }, | ||
| { | ||
| "cell_type": "code", | ||
| "execution_count": null, | ||
| "metadata": {}, | ||
| "outputs": [], | ||
| "source": [ | ||
| "m.set_center(-76.5134, 38.8973, 16)" | ||
| ] | ||
| }, | ||
| { | ||
| "cell_type": "code", | ||
| "execution_count": null, | ||
| "metadata": {}, | ||
| "outputs": [], | ||
| "source": [ | ||
| "m.add(\"spectral\")" | ||
| ] | ||
| }, | ||
| { | ||
| "cell_type": "markdown", | ||
| "metadata": {}, | ||
| "source": [ | ||
| "" | ||
| ] | ||
| } | ||
| ], | ||
| "metadata": { | ||
| "kernelspec": { | ||
| "display_name": "hyper", | ||
| "language": "python", | ||
| "name": "python3" | ||
| }, | ||
| "language_info": { | ||
| "codemirror_mode": { | ||
| "name": "ipython", | ||
| "version": 3 | ||
| }, | ||
| "file_extension": ".py", | ||
| "mimetype": "text/x-python", | ||
| "name": "python", | ||
| "nbconvert_exporter": "python", | ||
| "pygments_lexer": "ipython3", | ||
| "version": "3.10.14" | ||
| } | ||
| }, | ||
| "nbformat": 4, | ||
| "nbformat_minor": 2 | ||
| } |
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| # neon module | ||
|
|
||
| ::: hypercoast.neon |
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