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Feature/no ref/foundation model #3649

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Feature/no ref/foundation model

Feature/no ref/foundation model #3649

Run time

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Job Run time
run_ci_check_job
8s
list
1m 12s
viash_test (spatial_decomposition/metrics/r2, /home/runner/work/openproblems-v2/openproblems-v2/s...
1m 8s
viash_test (spatial_decomposition/methods/tangram, /home/runner/work/openproblems-v2/openproblems...
3m 26s
viash_test (spatial_decomposition/methods/rctd, /home/runner/work/openproblems-v2/openproblems-v2...
19m 10s
viash_test (spatial_decomposition/methods/stereoscope, /home/runner/work/openproblems-v2/openprob...
7m 37s
viash_test (spatial_decomposition/methods/nnls, /home/runner/work/openproblems-v2/openproblems-v2...
2m 55s
viash_test (spatial_decomposition/methods/vanillanmf, /home/runner/work/openproblems-v2/openprobl...
1m 12s
viash_test (spatial_decomposition/methods/destvi, /home/runner/work/openproblems-v2/openproblems-...
9m 35s
viash_test (spatial_decomposition/methods/cell2location, /home/runner/work/openproblems-v2/openpr...
21m 3s
viash_test (spatial_decomposition/methods/seurat, /home/runner/work/openproblems-v2/openproblems-...
2m 29s
viash_test (spatial_decomposition/methods/nmfreg, /home/runner/work/openproblems-v2/openproblems-...
2m 52s
viash_test (spatial_decomposition/control_methods/random_proportions, /home/runner/work/openprobl...
1m 19s
viash_test (spatial_decomposition/control_methods/true_proportions, /home/runner/work/openproblem...
1m 8s
viash_test (predict_modality/metrics/correlation, /home/runner/work/openproblems-v2/openproblems-...
2m 42s
viash_test (predict_modality/metrics/mse, /home/runner/work/openproblems-v2/openproblems-v2/src/t...
2m 17s
viash_test (predict_modality/methods/lmds_irlba_rf, /home/runner/work/openproblems-v2/openproblem...
3m 14s
viash_test (predict_modality/methods/lm, /home/runner/work/openproblems-v2/openproblems-v2/src/ta...
3m 23s
viash_test (predict_modality/methods/knnr_r, /home/runner/work/openproblems-v2/openproblems-v2/sr...
1m 20s
viash_test (predict_modality/methods/guanlab_dengkw_pm, /home/runner/work/openproblems-v2/openpro...
1m 19s
viash_test (predict_modality/methods/knnr_py, /home/runner/work/openproblems-v2/openproblems-v2/s...
1m 30s
viash_test (label_projection/metrics/accuracy, /home/runner/work/openproblems-v2/openproblems-v2/...
1m 13s
viash_test (label_projection/metrics/f1, /home/runner/work/openproblems-v2/openproblems-v2/src/ta...
1m 12s
viash_test (label_projection/methods/mlp, /home/runner/work/openproblems-v2/openproblems-v2/src/t...
1m 11s
viash_test (label_projection/methods/naive_bayes, /home/runner/work/openproblems-v2/openproblems-...
1m 20s
viash_test (label_projection/methods/knn, /home/runner/work/openproblems-v2/openproblems-v2/src/t...
2m 43s
viash_test (label_projection/methods/scanvi, /home/runner/work/openproblems-v2/openproblems-v2/sr...
7m 53s
viash_test (label_projection/methods/xgboost, /home/runner/work/openproblems-v2/openproblems-v2/s...
1m 19s
viash_test (label_projection/methods/scanvi_scarches, /home/runner/work/openproblems-v2/openprobl...
8m 9s
viash_test (label_projection/methods/logistic_regression, /home/runner/work/openproblems-v2/openp...
2m 35s
viash_test (denoising/metrics/poisson, /home/runner/work/openproblems-v2/openproblems-v2/src/task...
2m 39s
viash_test (denoising/metrics/mse, /home/runner/work/openproblems-v2/openproblems-v2/src/tasks/de...
1m 19s
viash_test (denoising/methods/magic, /home/runner/work/openproblems-v2/openproblems-v2/src/tasks/...
2m 43s
viash_test (denoising/methods/dca, /home/runner/work/openproblems-v2/openproblems-v2/src/tasks/de...
3m 16s
viash_test (denoising/methods/knn_smoothing, /home/runner/work/openproblems-v2/openproblems-v2/sr...
1m 32s
viash_test (denoising/methods/alra, /home/runner/work/openproblems-v2/openproblems-v2/src/tasks/d...
2m 9s
viash_test (dimensionality_reduction/metrics/coranking, /home/runner/work/openproblems-v2/openpro...
1m 25s
viash_test (dimensionality_reduction/metrics/trustworthiness, /home/runner/work/openproblems-v2/o...
2m 29s
viash_test (dimensionality_reduction/metrics/density_preservation, /home/runner/work/openproblems...
3m 1s
viash_test (dimensionality_reduction/metrics/clustering_performance, /home/runner/work/openproble...
1m 30s
viash_test (dimensionality_reduction/metrics/distance_correlation, /home/runner/work/openproblems...
2m 33s
viash_test (dimensionality_reduction/methods/phate, /home/runner/work/openproblems-v2/openproblem...
1m 32s
viash_test (dimensionality_reduction/methods/pymde, /home/runner/work/openproblems-v2/openproblem...
2m 47s
viash_test (dimensionality_reduction/methods/simlr, /home/runner/work/openproblems-v2/openproblem...
3m 39s
viash_test (dimensionality_reduction/methods/ivis, /home/runner/work/openproblems-v2/openproblems...
3m 38s
viash_test (dimensionality_reduction/methods/tsne, /home/runner/work/openproblems-v2/openproblems...
1m 23s
viash_test (dimensionality_reduction/methods/lmds, /home/runner/work/openproblems-v2/openproblems...
2m 48s
viash_test (dimensionality_reduction/methods/umap, /home/runner/work/openproblems-v2/openproblems...
2m 13s
viash_test (dimensionality_reduction/methods/densmap, /home/runner/work/openproblems-v2/openprobl...
2m 48s
viash_test (dimensionality_reduction/methods/neuralee, /home/runner/work/openproblems-v2/openprob...
5m 28s
viash_test (dimensionality_reduction/methods/diffusion_map, /home/runner/work/openproblems-v2/ope...
3m 7s
viash_test (dimensionality_reduction/methods/pca, /home/runner/work/openproblems-v2/openproblems-...
3m 22s
viash_test (batch_integration/metrics/asw_batch, /home/runner/work/openproblems-v2/openproblems-v...
1m 15s
viash_test (batch_integration/metrics/isolated_label_f1, /home/runner/work/openproblems-v2/openpr...
1m 17s
viash_test (batch_integration/metrics/pcr, /home/runner/work/openproblems-v2/openproblems-v2/src/...
1m 11s
viash_test (batch_integration/metrics/graph_connectivity, /home/runner/work/openproblems-v2/openp...
1m 35s
viash_test (batch_integration/metrics/kbet, /home/runner/work/openproblems-v2/openproblems-v2/src...
3m 37s
viash_test (batch_integration/metrics/isolated_label_asw, /home/runner/work/openproblems-v2/openp...
3m 0s
viash_test (batch_integration/metrics/cell_cycle_conservation, /home/runner/work/openproblems-v2/...
1m 20s
viash_test (batch_integration/metrics/hvg_overlap, /home/runner/work/openproblems-v2/openproblems...
1m 19s
viash_test (batch_integration/metrics/asw_label, /home/runner/work/openproblems-v2/openproblems-v...
1m 13s
viash_test (batch_integration/metrics/clustering_overlap, /home/runner/work/openproblems-v2/openp...
2m 18s
viash_test (batch_integration/methods/bbknn, /home/runner/work/openproblems-v2/openproblems-v2/sr...
1m 33s
viash_test (batch_integration/methods/fastmnn_feature, /home/runner/work/openproblems-v2/openprob...
1m 53s
viash_test (batch_integration/methods/scanvi, /home/runner/work/openproblems-v2/openproblems-v2/s...
7m 14s
viash_test (batch_integration/methods/pyliger, /home/runner/work/openproblems-v2/openproblems-v2/...
2m 43s
viash_test (batch_integration/methods/scvi, /home/runner/work/openproblems-v2/openproblems-v2/src...
9m 53s
viash_test (batch_integration/methods/scanorama_feature, /home/runner/work/openproblems-v2/openpr...
5m 11s
viash_test (batch_integration/methods/fastmnn_embedding, /home/runner/work/openproblems-v2/openpr...
1m 49s
viash_test (batch_integration/methods/scalex_embed, /home/runner/work/openproblems-v2/openproblem...
2m 33s
viash_test (batch_integration/methods/combat, /home/runner/work/openproblems-v2/openproblems-v2/s...
2m 10s
viash_test (batch_integration/methods/scalex_feature, /home/runner/work/openproblems-v2/openprobl...
8m 37s
viash_test (batch_integration/methods/mnnpy, /home/runner/work/openproblems-v2/openproblems-v2/sr...
1m 50s
viash_test (batch_integration/methods/scgpt_embedding, /home/runner/work/openproblems-v2/openprob...
8m 43s
viash_test (batch_integration/methods/scanorama_embed, /home/runner/work/openproblems-v2/openprob...
1m 38s
viash_test (batch_integration/methods/liger, /home/runner/work/openproblems-v2/openproblems-v2/sr...
2m 58s
viash_test (batch_integration/methods/mnn_correct, /home/runner/work/openproblems-v2/openproblems...
1m 35s
viash_test (match_modalities/metrics/knn_auc, /home/runner/work/openproblems-v2/openproblems-v2/s...
1m 34s
viash_test (match_modalities/metrics/mse, /home/runner/work/openproblems-v2/openproblems-v2/src/t...
1m 19s
viash_test (match_modalities/methods/fastmnn, /home/runner/work/openproblems-v2/openproblems-v2/s...
1m 54s
viash_test (match_modalities/methods/scot, /home/runner/work/openproblems-v2/openproblems-v2/src/...
7m 45s
viash_test (match_modalities/methods/harmonic_alignment, /home/runner/work/openproblems-v2/openpr...
2m 24s
viash_test (match_modalities/methods/procrustes, /home/runner/work/openproblems-v2/openproblems-v...
1m 42s
viash_test (match_modalities/control_methods/true_features, /home/runner/work/openproblems-v2/ope...
3m 5s
viash_test (match_modalities/control_methods/random_features, /home/runner/work/openproblems-v2/o...
1m 16s
viash_test (common/create_task_readme, /home/runner/work/openproblems-v2/openproblems-v2/src/comm...
2m 27s
viash_test (common/create_component, /home/runner/work/openproblems-v2/openproblems-v2/src/common...
45s
viash_test (common/process_task_results/yaml_to_json, /home/runner/work/openproblems-v2/openprobl...
2m 52s
viash_test (common/process_task_results/get_task_info, /home/runner/work/openproblems-v2/openprob...
2m 25s
viash_test (common/process_task_results/get_method_info, /home/runner/work/openproblems-v2/openpr...
1m 16s
viash_test (common/process_task_results/get_metric_info, /home/runner/work/openproblems-v2/openpr...
2m 38s
viash_test (common/process_task_results/get_dataset_info, /home/runner/work/openproblems-v2/openp...
1m 14s
4h 48m 56s