fix numpy issues

openproblems-bio · Sep 3, 2024 · bf78774 · bf78774
1 parent 46226f0
commit bf78774
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diff --git a/src/datasets/normalization/l1_sqrt/config.vsh.yaml b/src/datasets/normalization/l1_sqrt/config.vsh.yaml
@@ -21,7 +21,7 @@ platforms:
       - type: python
         packages:
           - scprep
-          - numpy
+          - numpy<2
   - type: nextflow
     directives: 
       label: [midtime, midmem, midcpu]
diff --git a/src/tasks/denoising/metrics/mse/config.vsh.yaml b/src/tasks/denoising/metrics/mse/config.vsh.yaml
@@ -25,6 +25,7 @@ platforms:
         packages:
           - scikit-learn
           - scprep
+          - numpy<2
   - type: nextflow
     directives: 
       label: [midtime, highmem, midcpu]