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openproblems-bio / task_ist_preprocessing Public

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Fix test for ssam cell type annotation #63

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Fix test for ssam cell type annotation

Fix test for ssam cell type annotation #63

Summary
Jobs
- Build target branch
  
  Build (basic_qc_filter, executable, docker|native, src/methods_qc_filter/basic/config.vsh.yaml, t...
  
  Build (process_dataset, data_processors, executable, docker|native, src/data_processors/process_d...
  
  Build (custom, methods, executable, docker|native, src/methods_segmentation/custom/config.vsh.yam...
  
  Build (ssam, methods, executable, docker|native, src/methods_cell_type_annotation/ssam/config.vsh...
  
  Build (basic, methods, executable, docker|native, src/methods_transcript_assignment/basic/config....
  
  Build (normalize_by_volume, methods, executable, docker|native, src/methods_normalization/normali...
  
  Build (alpha_shapes, methods, executable, docker|native, src/methods_calculate_cell_volume/alpha_...
  
  Build (basic, count_aggregation, executable, docker|native, src/methods_count_aggregation/basic/c...
  
  Build (allen_brain_cell_atlas, datasets/loaders, executable, docker|native, src/datasets/loaders/...
  
  Build (tenx_xenium, datasets/loaders, executable, docker|native, src/datasets/loaders/tenx_xenium...
  
  Build (crop_region, datasets/processors, executable, docker, src/datasets/processors/crop_region/...
  
  Build (similarity_metrics, metrics, executable, docker|native, src/metrics/similarity/config.vsh....
  
  Build (gene_efficiency_correction, executable, docker|native, src/methods_expression_correction/g...
Run details
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- Workflow file

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build / Build (process_dataset, data_processors, executable, docker|native, src/data_processors/process_d...

succeeded Sep 22, 2024 in 3m 51s

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