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Add shp counts #151

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merged 6 commits into from
Oct 10, 2024
Merged

Add shp counts #151

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d101c23
Save `DisplacementWorkflow` yaml in metadata
scottstanie Sep 26, 2024
14d37fb
Add `shp_counts` layer to show number of multilooking used
scottstanie Sep 26, 2024
bec8688
pass through `stitched_shp_count_file`
scottstanie Oct 10, 2024
b76a874
Merge branch 'main' into add-shp-counts
scottstanie Oct 10, 2024
806baa0
use int16 for shp counts
scottstanie Oct 10, 2024
1c15e2f
fix path iteration
scottstanie Oct 10, 2024
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3 changes: 3 additions & 0 deletions src/disp_s1/main.py
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Original file line number Diff line number Diff line change
Expand Up @@ -153,6 +153,7 @@ class ProductFiles(NamedTuple):
conncomp: Path
temp_coh: Path
correlation: Path
shp_counts: Path
ps_mask: Path
troposphere: Path | None
ionosphere: Path | None
Expand Down Expand Up @@ -235,6 +236,7 @@ def process_product(
temp_coh_filename=files.temp_coh,
ifg_corr_filename=files.correlation,
ps_mask_filename=files.ps_mask,
shp_count_filename=files.shp_counts,
unwrapper_mask_filename=files.unwrapper_mask,
los_east_file=los_east_file,
los_north_file=los_north_file,
Expand Down Expand Up @@ -315,6 +317,7 @@ def create_displacement_products(
temp_coh=out_paths.stitched_temp_coh_file,
correlation=cor,
ps_mask=out_paths.stitched_ps_file,
shp_counts=out_paths.stitched_shp_count_file,
troposphere=tropo,
ionosphere=iono,
unwrapper_mask=mask_f,
Expand Down
6 changes: 5 additions & 1 deletion src/disp_s1/product.py
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Original file line number Diff line number Diff line change
Expand Up @@ -83,6 +83,7 @@ def create_output_product(
temp_coh_filename: Filename,
ifg_corr_filename: Filename,
ps_mask_filename: Filename,
shp_count_filename: Filename,
unwrapper_mask_filename: Filename | None,
pge_runconfig: RunConfig,
dolphin_config: DisplacementWorkflow,
Expand Down Expand Up @@ -110,6 +111,8 @@ def create_output_product(
The path to the input interferometric correlation image.
ps_mask_filename : Filename
The path to the input persistent scatterer mask image.
shp_count_filename : Filename
The path to statistically homogeneous pixels (SHP) counts.
unwrapper_mask_filename : Filename, optional
The path to the boolean mask used during unwrapping to ignore pixels.
pge_runconfig : Optional[RunConfig], optional
Expand Down Expand Up @@ -264,12 +267,13 @@ def create_output_product(
temp_coh_filename,
ifg_corr_filename,
ps_mask_filename,
shp_count_filename,
unwrapper_mask_filename,
]

for info, filename in zip(product_infos[2:], data_files):
if filename is not None and Path(filename).exists():
data = io.load_gdal(filename)
data = io.load_gdal(filename).astype(info.dtype)
else:
data = np.full(shape=shape, fill_value=info.fillvalue, dtype=info.dtype)

Expand Down
17 changes: 12 additions & 5 deletions src/disp_s1/product_info.py
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Expand Up @@ -53,7 +53,6 @@ class DisplacementProducts:
dtype=np.float32,
)
)

connected_component_labels: ProductInfo = field(
default_factory=lambda: ProductInfo(
name="connected_component_labels",
Expand All @@ -63,7 +62,6 @@ class DisplacementProducts:
dtype=np.uint16,
)
)

temporal_coherence: ProductInfo = field(
default_factory=lambda: ProductInfo(
name="temporal_coherence",
Expand All @@ -75,7 +73,6 @@ class DisplacementProducts:
dtype=np.float32,
)
)

interferometric_correlation: ProductInfo = field(
default_factory=lambda: ProductInfo(
name="interferometric_correlation",
Expand All @@ -90,7 +87,6 @@ class DisplacementProducts:
dtype=np.float32,
)
)

persistent_scatterer_mask: ProductInfo = field(
default_factory=lambda: ProductInfo(
name="persistent_scatterer_mask",
Expand All @@ -103,7 +99,18 @@ class DisplacementProducts:
dtype=np.uint8,
)
)

shp_counts: ProductInfo = field(
default_factory=lambda: ProductInfo(
name="shp_counts",
description=(
"Number of statistically homogeneous pixels (SHPs) used during"
" multilooking."
),
fillvalue=0,
attrs={"units": "unitless"},
dtype=np.int16,
)
)
unwrapper_mask: ProductInfo = field(
default_factory=lambda: ProductInfo(
name="unwrapper_mask",
Expand Down
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