Repositories list

• GenomicsDB

  Public
  High performance data storage for importing, querying and transforming variants.

  javabioinformaticsscala+ 9sparkgenomicscppmpigatkvariant-callingvariant+ 2

  C++

  •

  Other

  •17•98•25•8•Updated Feb 20, 2025Feb 20, 2025

• GenomicsDB-Python

  Public
  Experimental Python Bindings to the native GenomicsDB library

  pythongenomicsdb

  Python

  •

  MIT License

  •0•1•1•0•Updated Feb 20, 2025Feb 20, 2025

• TestGenomicsDBJar

  Public
  Test GenomicsDB jar from Maven central with GitHub Actions

  Shell

  •0•1•0•0•Updated Jan 31, 2025Jan 31, 2025

• GenomicsDB-Go

  Public
  Experimental golang bindings to GenomicsDB

  Go

  •

  MIT License

  •0•0•0•0•Updated Nov 27, 2023Nov 27, 2023

• GenomicsDB-R

  Public
  Experimental R bindings to the native GenomicsDB library

  rgenomicsgenomics-data+ 1genomicsdb

  R

  •

  GNU General Public License v2.0

  •2•4•2•0•Updated Nov 20, 2023Nov 20, 2023

• htslib

  Public
  C library for high-throughput sequencing data formats

  C

  •

  Other

  •443•1•0•2•Updated Sep 25, 2023Sep 25, 2023

• GKL

  Public
  Accelerated kernel library for genomics

  C

  •

  MIT License

  •41•1•0•0•Updated Nov 8, 2018Nov 8, 2018

• GenomicsSampleAPIs

  Public
  Python

  •

  MIT License

  •1•1•0•0•Updated Jun 22, 2017Jun 22, 2017