Repositories list

• rhds-tcga

  Public
  R

  •0•0•0•0•Updated Feb 7, 2025Feb 7, 2025

• opengwas-redis-proxy

  Public
  Python

  •0•0•0•0•Updated Feb 7, 2025Feb 7, 2025

• upptime

  Public
  Use upptime to monitor web platform status

  uptime-monitorstatus-pageupptime

  JSON

  •

  MIT License

  •0•1•1•0•Updated Feb 7, 2025Feb 7, 2025

• opengwas-gwas-indexing

  Public
  Python

  •0•0•0•0•Updated Feb 6, 2025Feb 6, 2025

• multi-ancestry-prs-practical

  Public
  Multi-ancestry PRS practical

  R

  •

  MIT License

  •0•0•0•0•Updated Feb 5, 2025Feb 5, 2025

• docker_twosamplemr

  Public
  Dockerfile for TwoSampleMR DockerHub image

  Dockerfile

  •0•0•0•0•Updated Feb 5, 2025Feb 5, 2025

• temmpo

  Public
  Text mining for mechanism prioritisation

  mesh-terms

  Python

  •

  GNU General Public License v3.0

  •2•6•0•1•Updated Feb 5, 2025Feb 5, 2025

• Lifecourse-GWAS

  Public
  R

  •

  MIT License

  •0•5•8•0•Updated Feb 5, 2025Feb 5, 2025

• TwoSampleMR

  Public
  R package for performing 2-sample MR using MR-Base database

  R

  •

  Other

  •177•461•221•4•Updated Feb 5, 2025Feb 5, 2025

• MVMRalcsmo

  Public
  A repository of code for a MVMR study of the effect of alcohol and smoking on lung function

  R

  •1•1•0•0•Updated Feb 3, 2025Feb 3, 2025

• opengwas-api

  Public
  API for MRC-IEU OpenGWAS

  bioinformaticsgwaspopulation-genetics+ 2summary-statisticsmendelian-randomization

  Python

  •2•5•5•0•Updated Feb 3, 2025Feb 3, 2025

• opengwas-phewas-indexing

  Public
  Python

  •0•0•0•0•Updated Feb 3, 2025Feb 3, 2025

• genotype-phenotype-api

  Public
  JavaScript

  •

  GNU General Public License v3.0

  •0•0•0•0•Updated Feb 3, 2025Feb 3, 2025

• bbt_research

  Public
  Research on basal body temperature

  Python

  •

  MIT License

  •1•0•0•0•Updated Jan 27, 2025Jan 27, 2025

• IL6-activity

  Public
  Modelling the effect of IL-6 bioavailability/activity using genetic variants.

  R

  •0•0•0•0•Updated Jan 24, 2025Jan 24, 2025

• RDS-short-course

  Public
  Reproducible Data Science short course

  MIT License

  •0•1•0•0•Updated Jan 22, 2025Jan 22, 2025

• bp-drug-mr

  Public
  Multi-ancestry MR of blood pressure drug targets

  HTML

  •2•8•1•0•Updated Jan 21, 2025Jan 21, 2025

• mrcieu.r-universe.dev

  Public
  R packages for mrcieu.r-universe.dev

  Just

  •1•4•2•0•Updated Jan 20, 2025Jan 20, 2025

• mr-pubmed-abstracts

  Public
  Analysis of MR PubMed Abstracts

  Python

  •

  GNU General Public License v3.0

  •1•0•0•0•Updated Dec 24, 2024Dec 24, 2024

• mdd-proteome-ancestry

  Public
  Group 6 project

  HTML

  •

  MIT License

  •4•1•0•1•Updated Dec 10, 2024Dec 10, 2024

• GwasDataImport

  Public
  R package to upload data to GWAS database

  R

  •

  Other

  •1•3•6•0•Updated Dec 9, 2024Dec 9, 2024

• ukb-rap-utils

  Public
  Shell

  •

  GNU General Public License v3.0

  •0•2•0•0•Updated Dec 6, 2024Dec 6, 2024

• quarto-intro

  Public
  Introduction to quarto given at the IEU retreat

  JavaScript

  •1•0•0•0•Updated Nov 25, 2024Nov 25, 2024

• ieu-retreat-workshop-conda-snakemake

  Public
  R

  •0•0•0•0•Updated Nov 25, 2024Nov 25, 2024

• python_and_health_ds_training

  Public
  Repo for Introductions to Python and Applied Health Data Science Training

  Jupyter Notebook

  •2•9•0•0•Updated Nov 13, 2024Nov 13, 2024

• conda-hpc-snakemake-example

  Public
  Example for AHDS

  R

  •

  MIT License

  •23•0•0•0•Updated Nov 12, 2024Nov 12, 2024

• rare-polygenic

  Public
  R

  •

  GNU General Public License v3.0

  •0•0•0•0•Updated Nov 5, 2024Nov 5, 2024

• medication-adjustment

  Public
  R

  •

  MIT License

  •0•1•0•0•Updated Nov 3, 2024Nov 3, 2024

• dnam-lung-cancer-screening-panel

  Public
  HTML

  •0•2•0•0•Updated Oct 13, 2024Oct 13, 2024

• MSHDS-AHDS-formative

  Public
  Shell

  •0•1•0•0•Updated Oct 1, 2024Oct 1, 2024