QCB-Collaboratory

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28 repositories

W22.Protein.Protein.Interactions
Public
Python
•1•0•0•0•Updated Feb 6, 2020Feb 6, 2020
W1.UNIX.command.line
Public
materials for the workshop on UNIX command line
unix command-line sed grep unix-command bash-script awk-script
C
•11•13•0•0•Updated May 23, 2019May 23, 2019
W9.Python
Public
Introduction to Python Workshop
Jupyter Notebook
•3•4•0•0•Updated May 8, 2019May 8, 2019
W17.MachineLearning
Public
Course material for the Collaboratory Workshop "Machine Learning with Python"
machine-learning workshop biology workshop-materials molecular-biology
Jupyter Notebook
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GNU General Public License v3.0
•13•29•0•0•Updated Feb 11, 2019Feb 11, 2019
W21.Digital.Imaging.Processing.with.Python
Public
0•0•0•0•Updated Dec 17, 2018Dec 17, 2018
W20.Single-Cell.RNA-Seq
Public
0•0•0•0•Updated Dec 17, 2018Dec 17, 2018
W19.Intro.to.Homology.Modeling
Public
0•0•0•0•Updated Dec 17, 2018Dec 17, 2018
W18.Advanced.Python
Public
0•0•0•0•Updated Dec 17, 2018Dec 17, 2018
W16.Library.Prep.for.NGS
Public
0•0•0•0•Updated Dec 17, 2018Dec 17, 2018
W15.RAD-Seq.Analysis
Public
0•0•0•0•Updated Dec 17, 2018Dec 17, 2018
W14.Intro.to.Modern.Statistics
Public
0•0•0•0•Updated Dec 17, 2018Dec 17, 2018
W13.Intro.to.Phylogenetics
Public
0•0•0•0•Updated Dec 17, 2018Dec 17, 2018
W12.Intro.to.MATLAB
Public
0•0•0•0•Updated Dec 17, 2018Dec 17, 2018
W11.Metagenomics.Analysis
Public
0•0•0•0•Updated Dec 17, 2018Dec 17, 2018
W10.Intro.to.Hi-C
Public
0•0•0•0•Updated Dec 17, 2018Dec 17, 2018
W8.Variant.Discovery.with.GATK
Public
0•0•0•0•Updated Dec 17, 2018Dec 17, 2018
W7.ChIP-seq.Analysis
Public
0•0•0•0•Updated Dec 17, 2018Dec 17, 2018
W6.BS-Sequencing
Public
0•0•0•0•Updated Dec 17, 2018Dec 17, 2018
W5b.RNA-seq.II.Analysis
Public
0•0•0•0•Updated Dec 17, 2018Dec 17, 2018
W5a.RNA-seq.I.Analysis
Public
0•0•0•0•Updated Dec 17, 2018Dec 17, 2018
W4.Galaxy.for.NGS.Data.Analysis
Public
0•0•0•0•Updated Dec 17, 2018Dec 17, 2018
W4.GalaxyforNGS
Public
0•0•0•0•Updated Nov 16, 2018Nov 16, 2018
W3.Intro.to.R
Public
0•0•0•0•Updated Nov 16, 2018Nov 16, 2018
W2.UsingNGSAnalysisTools
Public
0•0•0•0•Updated Nov 16, 2018Nov 16, 2018
telescope
Public
Telescope server repository
unix genomics web-app sge-cluster
Python
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Other
•3•4•5•0•Updated Apr 9, 2018Apr 9, 2018
Python-Hackathon-Fall2017
Public
Materials and resources for the Python Hackathon hosted by the QCBio - UCLA
quantitative-methods python hackathon biology python-workshop
Jupyter Notebook
•2•0•0•0•Updated Feb 23, 2018Feb 23, 2018
Python-Hackathon-Winter2018
Public
Materials and resources for the Python Hackathon hosted by the QCBio - UCLA
python hackathon biology python-workshop quantitative-methods
Python
•2•3•0•0•Updated Feb 23, 2018Feb 23, 2018
SignalPclient
Public
Client to submit jobs to SignalP Server and find cleavage sites of signal peptides
Python
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MIT License
•0•1•0•0•Updated Jan 8, 2018Jan 8, 2018