Repositories list

• covid19-smh-research

  Public
  COVID-19 Scenario Modeling Hub - Research

  R

  •

  MIT License

  •8•4•0•0•Updated Feb 12, 2025Feb 12, 2025

• SMHviz_plot

  Public
  Python librairy for the US Scenario Modeling Hub (SMH) plots

  Python

  •

  MIT License

  •1•1•10•2•Updated Feb 11, 2025Feb 11, 2025

• tycho_national_incidence

  Public
  JavaScript

  •

  MIT License

  •0•0•0•0•Updated Feb 11, 2025Feb 11, 2025

• rsv-scenario-modeling-hub

  Public
  RSV Scenario Modeling Hub

  R

  •

  MIT License

  •20•9•0•0•Updated Feb 8, 2025Feb 8, 2025

• SMHvalidation

  Public
  R

  •

  Other

  •0•5•12•0•Updated Feb 7, 2025Feb 7, 2025

• SMHviz_layout

  Public
  Python librairy for the Scenario Modeling Hub (SMH) websites layout pages

  Python

  •

  MIT License

  •0•0•4•0•Updated Jan 28, 2025Jan 28, 2025

• covid19-scenario-modeling-hub

  Public
  COVID-19 Scenario Modeling Hub

  HTML

  •46•64•1•0•Updated Jan 13, 2025Jan 13, 2025

• flu-scenario-modeling-hub

  Public
  Flu Scenario Modeling Hub

  R

  •26•10•0•2•Updated Jan 13, 2025Jan 13, 2025

• example_round-scenariohub

  Public
  R

  •

  MIT License

  •2•0•1•0•Updated Jan 13, 2025Jan 13, 2025

• midas-visualization-data-zipper

  Public
  0•0•0•0•Updated Nov 18, 2024Nov 18, 2024

• research-clustering

  Public
  Python

  •0•0•0•0•Updated Nov 16, 2024Nov 16, 2024

• midas-discover-webservice

  Public
  A Flask webservice to provide data for midas visualization

  Python

  •0•0•0•0•Updated Nov 16, 2024Nov 16, 2024

• midas-data

  Public
  An ontology for MIDAS data types

  Jupyter Notebook

  •4•1•4•0•Updated Nov 11, 2024Nov 11, 2024

• flu-scenario-modeling-hub_resources

  Public
  R

  •2•10•0•0•Updated Aug 15, 2024Aug 15, 2024

• covid19-smh-research_resources

  Public
  COVID-19 Scenario Modeling Hub Research - Resources

  R

  •

  MIT License

  •0•1•0•0•Updated Jun 18, 2024Jun 18, 2024

• cromwell_flepimop_project

  Public
  Project repository for Cromwell encapsulation of FlepiMoP

  HTML

  •8•0•0•0•Updated May 24, 2024May 24, 2024

• cromwell-multi-model-demo

  Public
  This project demonstrates running multiple models using Cromwell, Python or R, and Docker.

  WDL

  •0•1•0•0•Updated May 21, 2024May 21, 2024

• cromwell-bayesian-model-covid-demo

  Public
  Shell

  •0•0•1•0•Updated May 20, 2024May 20, 2024

• cromwell-epispot

  Public
  This project demostrates running Epispot using Cromwell, Python, and Docker.

  Shell

  •0•0•0•0•Updated May 20, 2024May 20, 2024

• cromwell-SEIR-basic

  Public
  Shell

  •1•0•0•0•Updated Feb 13, 2024Feb 13, 2024

• covid19-scenario-hub_evaluation

  Public
  R

  •

  MIT License

  •1•0•0•0•Updated Dec 13, 2023Dec 13, 2023

• jaxlib-0.1.62

  Public
  0•0•0•0•Updated Nov 15, 2023Nov 15, 2023

• cromwell-demo

  Public
  R

  •1•0•0•0•Updated Jul 6, 2023Jul 6, 2023

• bayesian-covid-model-demo

  Public
  Bayesian modeling of COVID-19

  Jupyter Notebook

  •

  MIT License

  •17•1•0•0•Updated Jul 3, 2023Jul 3, 2023

• term-extraction

  Public
  Python

  •0•0•0•0•Updated Jun 14, 2023Jun 14, 2023

• cknowledge-covid-model

  Public
  Bayesian modeling of COVID-19

  Jupyter Notebook

  •

  MIT License

  •17•1•0•0•Updated Jun 2, 2023Jun 2, 2023

• cromwell-reproducibility-demo

  Public
  Shell

  •0•0•0•0•Updated Feb 22, 2023Feb 22, 2023

• ScenarioModelingHub.plot

  Public archive
  R

  •

  MIT License

  •0•0•1•0•Updated Jan 20, 2023Jan 20, 2023

• scraping-analysis

  Public
  Analysis of file name metadta from the MIDAS Curated Archive of Global Public Health Data

  Jupyter Notebook

  •0•0•0•0•Updated Dec 20, 2022Dec 20, 2022

• ScenarioModelingHub.shiny

  Public archive
  R

  •

  MIT License

  •0•0•0•0•Updated Dec 6, 2022Dec 6, 2022