Repositories list

• contarg

  Public
  A python package implementing/wrapping methods for functional connectivity personalized targeting of rTMS therapy.

  Jupyter Notebook

  •1•0•0•1•Updated Oct 2, 2024Oct 2, 2024

• abcd-dicom2bids

  Public
  For selectively downloading ABCD data QC'ed as good by the DAIC, converting it to BIDS standard input data, selecting the best pair of spin echo field maps, and correcting the sidecar JSON files to meet BIDS Validator spec.

  Python

  •

  BSD 3-Clause "New" or "Revised" License

  •20•0•11•0•Updated Jul 29, 2024Jul 29, 2024

• nielson_abcd_2018

  Public
  Code for Detecting and harmonizing scanner differences in the ABCD study - annual release 2.0

  Jupyter Notebook

  •3•4•0•0•Updated Jan 30, 2024Jan 30, 2024

• ml

  Public
  HTML

  •0•3•0•0•Updated Jan 29, 2024Jan 29, 2024

• scanner-change-timelines

  Public
  0•1•0•0•Updated Jan 18, 2024Jan 18, 2024

• project-tool

  Public
  FMRIF Project Management command-line tool

  Python

  •

  BSD 2-Clause "Simplified" License

  •0•1•0•0•Updated Nov 24, 2023Nov 24, 2023

• mi_test

  Public
  test ways to calculate mutual information between a discrete and continuous variable

  Jupyter Notebook

  •

  Creative Commons Zero v1.0 Universal

  •0•0•0•0•Updated Aug 29, 2023Aug 29, 2023

• mriqcwebapi

  Public
  Python

  •

  Apache License 2.0

  •13•0•0•1•Updated Feb 23, 2023Feb 23, 2023

• contarg_test_data

  Public
  some default

  0•0•0•0•Updated Feb 16, 2023Feb 16, 2023

• nimh_irp_clustering

  Public
  Jupyter Notebook

  •

  The Unlicense

  •1•1•0•0•Updated Oct 18, 2022Oct 18, 2022

• scanner-state-monitor

  Public
  Python

  •1•1•0•0•Updated Oct 15, 2022Oct 15, 2022

• sharestats

  Public
  HTML

  •0•0•0•0•Updated Oct 5, 2022Oct 5, 2022

• openneuro_search

  Public
  Jupyter Notebook

  •0•0•0•0•Updated Aug 1, 2022Aug 1, 2022

• pyretrodesign

  Public
  Python

  •

  Creative Commons Zero v1.0 Universal

  •0•1•0•0•Updated Jul 14, 2022Jul 14, 2022

• mlt-external

  Public
  Jupyter Notebook

  •0•0•0•0•Updated Jul 13, 2022Jul 13, 2022

• coders_forum

  Public
  A repo to document the tutorials/rants/discussions/musings at the coder's forum

  Roff

  •

  MIT License

  •5•4•0•0•Updated Feb 3, 2022Feb 3, 2022

• abcd_cca_replication

  Public
  MATLAB

  •0•2•0•0•Updated Dec 14, 2021Dec 14, 2021

• HCP_CCA_Analysis-1

  Public
  The purpose of this study is to replicate the results of Smith et al. (https://www.fmrib.ox.ac.uk/datasets/HCP-CCA/) and extend this analysis to the larger HCP_1200 dataset

  Jupyter Notebook

  •1•1•0•0•Updated Apr 30, 2021Apr 30, 2021

• NIH_IRP_PubDB

  Public
  An application to catalog and measure NIH IRP publications.

  Python

  •1•1•1•1•Updated Sep 29, 2020Sep 29, 2020

• dockerImage4DevMR

  Public archive
  Docker build info and associated configuration files to build development container for MR scanners.

  Shell

  •2•4•0•0•Updated Jul 7, 2020Jul 7, 2020

• nimh_ds_env

  Public
  NIHM OHBM Backend

  Python

  •0•0•0•0•Updated Jul 4, 2020Jul 4, 2020

• nih-fmrif.github.io

  Public
  This github org account is used by the Center for Mutlimodal Neuroimaging and the Functional MRI Facility at the NIMH Intramural Research Program in Bethesda, Maryland

  HTML

  •0•0•0•0•Updated Jun 23, 2020Jun 23, 2020

• nimh_ohbm

  Public
  NIMH OHBM front end

  JavaScript

  •2•0•0•0•Updated Jun 22, 2020Jun 22, 2020

• abcd_protocols

  Public
  Documentation of the scan protocols used to collect the ABCD data

  The Unlicense

  •0•8•2•0•Updated Jun 5, 2020Jun 5, 2020

• MLT_Body_Part_Segmentation

  Public
  Python

  •

  GNU General Public License v3.0

  •1•1•0•0•Updated May 5, 2020May 5, 2020

• machinelearning

  Public
  public code releases from the NIMH Machine Learning Team

  GNU General Public License v3.0

  •0•0•0•0•Updated Apr 28, 2020Apr 28, 2020

• nimh_fulltexts

  Public
  Downloading NIMH fulltext papers from PMC with the goal of finding data statements

  R

  •0•0•0•0•Updated Mar 2, 2020Mar 2, 2020

• git-training

  Public
  R

  •8•0•0•0•Updated Dec 19, 2019Dec 19, 2019

• codeconvergence

  Public
  The Unlicense

  •0•0•15•0•Updated Nov 14, 2019Nov 14, 2019

• bids-b0-tools

  Public archive
  Scripts, tools, and documents on creating, parsing, and working with BIDS-structured data sets.

  Shell

  •1•13•0•0•Updated Oct 30, 2019Oct 30, 2019