Repositories list

• library

  Public
  A website for sharing QIIME 2 Plugins

  Svelte

  •

  BSD 3-Clause "New" or "Revised" License

  •1•0•2•0•Updated Feb 10, 2025Feb 10, 2025

• distributions

  Public
  Makefile

  •

  BSD 3-Clause "New" or "Revised" License

  •5•1•5•1•Updated Feb 9, 2025Feb 9, 2025

• q2-feature-table

  Public
  QIIME 2 plugin supporting operations on feature tables.

  hacktoberfest

  Python

  •

  BSD 3-Clause "New" or "Revised" License

  •39•2•24•1•Updated Feb 7, 2025Feb 7, 2025

• q2-vsearch

  Public
  vsearch plugin for QIIME 2

  hacktoberfest

  Python

  •

  BSD 3-Clause "New" or "Revised" License

  •22•6•8•1•Updated Feb 7, 2025Feb 7, 2025

• static-site-infrastructure

  Public
  Dockerfile

  •

  BSD 3-Clause "New" or "Revised" License

  •3•0•3•0•Updated Feb 7, 2025Feb 7, 2025

• library-plugins

  Public
  Stores a list of the repos that are included in the QIIME 2 library

  BSD 3-Clause "New" or "Revised" License

  •5•0•0•2•Updated Feb 7, 2025Feb 7, 2025

• q2-deblur

  Public
  hacktoberfest

  Python

  •

  BSD 3-Clause "New" or "Revised" License

  •22•2•7•1•Updated Feb 7, 2025Feb 7, 2025

• q2-quality-control

  Public
  A QIIME 2 plugin for quality control of sequence and feature data

  hacktoberfest

  Python

  •

  BSD 3-Clause "New" or "Revised" License

  •17•4•8•0•Updated Feb 7, 2025Feb 7, 2025

• qiime2

  Public
  Official repository for the QIIME 2 framework.

  hacktoberfest

  Python

  •

  BSD 3-Clause "New" or "Revised" License

  •240•490•62•6•Updated Feb 7, 2025Feb 7, 2025

• q2-feature-classifier

  Public
  QIIME 2 plugin supporting taxonomic classification

  hacktoberfest

  Python

  •

  BSD 3-Clause "New" or "Revised" License

  •38•18•8•2•Updated Feb 6, 2025Feb 6, 2025

• q2doc

  Public
  A MyST executable plugin for documenting QIIME 2 plugins.

  Python

  •

  Other

  •0•0•1•0•Updated Feb 6, 2025Feb 6, 2025

• q2-dada2

  Public
  QIIME 2 plugin wrapping DADA2

  hacktoberfest

  Python

  •

  BSD 3-Clause "New" or "Revised" License

  •37•20•11•3•Updated Feb 6, 2025Feb 6, 2025

• q2-cutadapt

  Public
  hacktoberfest

  Python

  •

  BSD 3-Clause "New" or "Revised" License

  •18•3•3•1•Updated Feb 6, 2025Feb 6, 2025

• q2-composition

  Public
  hacktoberfest

  Python

  •

  BSD 3-Clause "New" or "Revised" License

  •27•6•7•2•Updated Feb 6, 2025Feb 6, 2025

• discourse-unhandled-tagger

  Public
  Simple plugin that tags topics automatically if non-staff replies

  Ruby

  •

  MIT License

  •8•0•0•1•Updated Feb 5, 2025Feb 5, 2025

• q2view

  Public
  A web-based "serverless" viewer of QIIME 2 Artifacts and Visualizations

  TypeScript

  •

  BSD 3-Clause "New" or "Revised" License

  •1•1•3•2•Updated Feb 5, 2025Feb 5, 2025

• q2-quality-filter

  Public
  Quality filtering for QIIME2

  hacktoberfest

  Python

  •

  BSD 3-Clause "New" or "Revised" License

  •16•1•3•0•Updated Jan 29, 2025Jan 29, 2025

• q2templates

  Public
  Design template package for QIIME 2 Plugins

  hacktoberfest

  Python

  •

  BSD 3-Clause "New" or "Revised" License

  •15•4•0•0•Updated Jan 18, 2025Jan 18, 2025

• q2galaxy

  Public
  Generate Galaxy tool descriptions automatically from QIIME 2 actions.

  hacktoberfest

  Python

  •

  BSD 3-Clause "New" or "Revised" License

  •18•19•10•0•Updated Jan 18, 2025Jan 18, 2025

• q2cli

  Public
  Command line interface for QIIME 2

  hacktoberfestq2interface

  Python

  •

  BSD 3-Clause "New" or "Revised" License

  •24•19•14•1•Updated Jan 18, 2025Jan 18, 2025

• q2-vizard

  Public
  The first choice of wizard lizards for interactive, generalized microbiome data visualization!

  Python

  •

  BSD 3-Clause "New" or "Revised" License

  •9•1•6•1•Updated Jan 18, 2025Jan 18, 2025

• q2-types

  Public
  hacktoberfest

  Python

  •

  BSD 3-Clause "New" or "Revised" License

  •41•17•27•3•Updated Jan 18, 2025Jan 18, 2025

• q2-taxa

  Public
  hacktoberfest

  Python

  •

  BSD 3-Clause "New" or "Revised" License

  •29•3•43•0•Updated Jan 18, 2025Jan 18, 2025

• q2-stats

  Public
  hacktoberfest

  Python

  •

  BSD 3-Clause "New" or "Revised" License

  •8•1•2•1•Updated Jan 18, 2025Jan 18, 2025

• q2-sample-classifier

  Public
  QIIME 2 plugin for machine learning prediction of sample data.

  hacktoberfest

  Python

  •

  BSD 3-Clause "New" or "Revised" License

  •36•6•15•0•Updated Jan 18, 2025Jan 18, 2025

• q2-phylogeny

  Public
  Phylogenetic reconstruction, and operations on phylogenetic trees.

  hacktoberfest

  Python

  •

  BSD 3-Clause "New" or "Revised" License

  •19•4•2•0•Updated Jan 18, 2025Jan 18, 2025

• q2-mystery-stew

  Public
  This plugin exists to define integration tests between interfaces and the framework.

  hacktoberfest

  Python

  •

  BSD 3-Clause "New" or "Revised" License

  •6•0•0•0•Updated Jan 18, 2025Jan 18, 2025

• q2-metadata

  Public
  hacktoberfest

  Python

  •

  BSD 3-Clause "New" or "Revised" License

  •18•3•6•0•Updated Jan 18, 2025Jan 18, 2025

• q2-longitudinal

  Public
  QIIME 2 plugin for paired sample comparisons

  hacktoberfest

  Python

  •

  BSD 3-Clause "New" or "Revised" License

  •18•9•30•1•Updated Jan 18, 2025Jan 18, 2025

• q2-fragment-insertion

  Public
  hacktoberfest

  Python

  •

  BSD 3-Clause "New" or "Revised" License

  •17•13•11•0•Updated Jan 18, 2025Jan 18, 2025