updated naming - added use cases

osc-em · Aug 7, 2024 · 7995f50 · 7995f50
1 parent 8fdaa5b
commit 7995f50
Show file tree

Hide file tree

Showing 10 changed files with 484 additions and 341 deletions.
diff --git a/src/data/examples/EMDataset-001.yaml b/src/data/examples/EMDataset-001.yaml
@@ -1,21 +1,21 @@
 # Example data object
 ---
-Instrument:
-  Microscope: Titan
-  Illumination: FloodBeam
-  Imaging: Brightfield
-  Electron_source: FEG
-  Acceleration_Voltage: 300
-  C2_Aperture: 70
-  CS: 2.7
-Acquisition:
-  Holder: testitest
-  Detector: Falcon 4i
-  Detector_mode: counting
-  Dose_per_movie: 0.5
-  Datetime: "2024-01-01"
-  Binning_camera: 2
-  Pixel_size: 1.2
+instrument:
+  microscope: Titan
+  illumination: FloodBeam
+  imaging: Brightfield
+  electron_source: FEG
+  acceleration_voltage: 300
+  c2_Aperture: 70
+  cs: 2.7
+acquisition:
+  holder: testitest
+  detector: Falcon 4i
+  detector_mode: counting
+  dose_per_movie: 0.5
+  datetime: "2024-01-01"
+  binning_camera: 2
+  pixel_size: 1.2
 grant:
   - grant_id: SNF321
     funding_agency: SNF
@@ -58,8 +58,7 @@ sample:
       gene_name: Rib
   ligands:
     - present: false
-      smile: C1CCCCC1
-   specimen:
+  specimen:
     concentration: 0.3
     ph: 7
     vitrification: false