sdmTMB 0.4.0
-
Move add_barrier_mesh() to sdmTMBextra to avoid final INLA dependency.
https://github.com/pbs-assess/sdmTMBextra -
Switch to using the new fmesher package for all mesh/SPDE calculations. INLA
is no longer a dependency. -
Switch to
diagonal.penalty = FALSE
in mgcv::smoothCon().
This changes the scale of the linear component of the smoother, but
should result in the same model.
glmmTMB/glmmTMB#928 (comment) -
Implement cross validation for delta models #239
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Remove ELPD from cross validation output. Use sum_loglik instead. #235
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Turn on Newton optimization by default. #182
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print() now checks sanity() and issues a warning if there may be issues. #176
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Poisson-link delta models and censored likelihood distributions have been made
considerably more robust. #186 -
Standard errors are now available on SD parameters etc. in tidy() #240
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Fix bug in print()/tidy() for delta-model positive model component sigma_E.
A recently introduce bug was causing sigma_E for the 2nd model to be reported
as the 1st model component sigma_E. -
Add new anisotropy plotting function.