add regex injection fixer with codeql for first example

core-codemods/src/main/java/io/codemodder/codemods/DefaultCodemods.java

@@ -36,6 +36,7 @@ public static List<Class<? extends CodeChanger>> asList() {
         CodeQLMavenSecureURLCodemod.class,
         CodeQLOutputResourceLeakCodemod.class,
         CodeQLPredictableSeedCodemod.class,
+        CodeQLRegexInjectionCodemod.class,
         CodeQLSQLInjectionCodemod.class,
         CodeQLSSRFCodemod.class,
         CodeQLStackTraceExposureCodemod.class,

core-codemods/src/main/java/io/codemodder/codemods/codeql/CodeQLRegexInjectionCodemod.java

@@ -0,0 +1,54 @@
+package io.codemodder.codemods.codeql;
+
+import com.contrastsecurity.sarif.Result;
+import com.github.javaparser.ast.CompilationUnit;
+import io.codemodder.*;
+import io.codemodder.codetf.DetectorRule;
+import io.codemodder.providers.sarif.codeql.ProvidedCodeQLScan;
+import io.codemodder.remediation.GenericRemediationMetadata;
+import io.codemodder.remediation.Remediator;
+import io.codemodder.remediation.regexinjection.RegexInjectionRemediator;
+import java.util.Optional;
+import javax.inject.Inject;
+
+/** A codemod for automatically fixing Regex Injections from CodeQL. */
+@Codemod(
+    id = "codeql:java/regex-injection",
+    reviewGuidance = ReviewGuidance.MERGE_AFTER_CURSORY_REVIEW,
+    importance = Importance.HIGH,
+    executionPriority = CodemodExecutionPriority.HIGH)
+public final class CodeQLRegexInjectionCodemod extends CodeQLRemediationCodemod {
+
+  private final Remediator<Result> remediator;
+
+  @Inject
+  public CodeQLRegexInjectionCodemod(
+      @ProvidedCodeQLScan(ruleId = "java/regex-injection") final RuleSarif sarif) {
+    super(GenericRemediationMetadata.REGEX_INJECTION.reporter(), sarif);
+    this.remediator = new RegexInjectionRemediator<>();
+  }
+
+  @Override
+  public DetectorRule detectorRule() {
+    return new DetectorRule(
+        "regex-injectiom",
+        "Regular expression injection",
+        "https://codeql.github.com/codeql-query-help/java/java-regex-injection/");
+  }
+
+  @Override
+  public CodemodFileScanningResult visit(
+      final CodemodInvocationContext context, final CompilationUnit cu) {
+    return remediator.remediateAll(
+        cu,
+        context.path().toString(),
+        detectorRule(),
+        ruleSarif.getResultsByLocationPath(context.path()),
+        SarifFindingKeyUtil::buildFindingId,
+        r -> r.getLocations().get(0).getPhysicalLocation().getRegion().getStartLine(),
+        r -> Optional.of(r.getLocations().get(0).getPhysicalLocation().getRegion().getEndLine()),
+        r ->
+            Optional.of(
+                r.getLocations().get(0).getPhysicalLocation().getRegion().getStartColumn()));
+  }
+}

core-codemods/src/test/java/io/codemodder/codemods/codeql/CodeQLRegexInjectionCodemodTest.java

@@ -0,0 +1,28 @@
+package io.codemodder.codemods.codeql;
+
+import io.codemodder.testutils.CodemodTestMixin;
+import io.codemodder.testutils.Metadata;
+import org.junit.jupiter.api.Nested;
+
+final class CodeQLRegexInjectionCodemodTest {
+
+  @Nested
+  @Metadata(
+      codemodType = CodeQLRegexInjectionCodemod.class,
+      testResourceDir = "codeql-regex-injection/bannedwordlist",
+      renameTestFile = "app/src/main/java/org/apache/roller/weblogger/util/Bannedwordslist.java",
+      expectingFixesAtLines = 438,
+      doRetransformTest = false,
+      dependencies = {})
+  class BannedWordlistTest implements CodemodTestMixin {}
+
+  @Nested
+  @Metadata(
+      codemodType = CodeQLRegexInjectionCodemod.class,
+      testResourceDir = "codeql-regex-injection/regexutil",
+      renameTestFile = "app/src/main/java/org/apache/roller/util/RegexUtil.java",
+      expectingFixesAtLines = {71, 66, 49},
+      doRetransformTest = false,
+      dependencies = {})
+  class RegexUtilTest implements CodemodTestMixin {}
+}