Update characterisation #24

	name: Update characterisation
	on:
	workflow_dispatch:
	# Run the second day of each month
	schedule:
	- cron: "0 0 2 * *"

	jobs:
	update-file:
	runs-on: ubuntu-20.04
	steps:
	- name: checkout
	uses: actions/checkout@v3
	with:
	fetch-depth: 0
	ref: master
	- name: Install Python
	uses: actions/setup-python@v1
	with:
	python-version: 3.9
	- name: Install dependencies
	run: \|
	sudo apt-get install subversion -y
	python -m pip install --upgrade pip
	pip install poetry
	poetry config virtualenvs.create false
	poetry install --no-dev
	- name: Update file
	run: \|
	cd gene_characterisation_status
	bash get_latest_numbers.sh
	bash update_characterisation.sh
	- name: Commit changes
	uses: stefanzweifel/git-auto-commit-action@v4
	with:
	commit_message: updated to last revision
	file_pattern: "gene_characterisation_status/results/.tsv gene_characterisation_status/results/.svg gene_characterisation_status/latest_revision/.txt gene_characterisation_status/latest_revision/.tsv"

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