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@kimrutherford @github-actions
kimrutherford authored and github-actions[bot] committed Jun 30, 2024
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Showing 14 changed files with 82 additions and 7 deletions.
2 changes: 2 additions & 0 deletions results/all_coordinate_changes_file.tsv
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revision user date chromosome systematic_id primary_name feature_type added_or_removed value
9820 vw253 2024-06-26 I SPSNORNA.18 snoU24 snoRNA added complement(5369613..5369691)
9820 vw253 2024-06-26 I SPSNORNA.18 snoU24 snoRNA removed complement(5369640..5369686)
9300 vw253 2023-11-10 II SPBC685.02 exo5 CDS removed join(2772884..2773046,2773102..2773166,2773317..2774093,2774223..2774447)
9300 vw253 2023-11-10 II SPBC685.02.1 exo5 CDS added join(2772884..2773046,2773102..2773166,2773317..2774093,2774223..2774447)
9300 vw253 2023-11-10 II SPBC685.02.2 exo5 CDS added join(2773110..2773166,2773317..2774093,2774223..2774447)
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2 changes: 2 additions & 0 deletions results/all_coordinate_changes_file_comments.tsv
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revision user date chromosome systematic_id primary_name feature_type added_or_removed value db_xref pombase_reference pombase_comments
9820 vw253 2024-06-26 I SPSNORNA.18 snoU24 snoRNA added complement(5369613..5369691)
9820 vw253 2024-06-26 I SPSNORNA.18 snoU24 snoRNA removed complement(5369640..5369686)
9300 vw253 2023-11-10 II SPBC685.02 exo5 CDS removed join(2772884..2773046,2773102..2773166,2773317..2774093,2774223..2774447)
9300 vw253 2023-11-10 II SPBC685.02.1 exo5 CDS added join(2772884..2773046,2773102..2773166,2773317..2774093,2774223..2774447)
9300 vw253 2023-11-10 II SPBC685.02.2 exo5 CDS added join(2773110..2773166,2773317..2774093,2774223..2774447)
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2 changes: 2 additions & 0 deletions results/all_coordinate_changes_file_comments_no_type_change.tsv
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revision user date chromosome systematic_id primary_name feature_type added_or_removed value db_xref pombase_reference pombase_comments
9820 vw253 2024-06-26 I SPSNORNA.18 snoU24 snoRNA added complement(5369613..5369691)
9820 vw253 2024-06-26 I SPSNORNA.18 snoU24 snoRNA removed complement(5369640..5369686)
9300 vw253 2023-11-10 II SPBC685.02 exo5 CDS removed join(2772884..2773046,2773102..2773166,2773317..2774093,2774223..2774447)
9300 vw253 2023-11-10 II SPBC685.02.1 exo5 CDS added join(2772884..2773046,2773102..2773166,2773317..2774093,2774223..2774447)
9300 vw253 2023-11-10 II SPBC685.02.2 exo5 CDS added join(2773110..2773166,2773317..2774093,2774223..2774447)
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1 change: 1 addition & 0 deletions results/all_previous_coords.tsv
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Expand Up @@ -6347,6 +6347,7 @@ I SPRPTA.25 repeat_region complement(join(5564531..5564853,5565067..5565187,556
I SPRPTA.26 repeat_region 5568686..5579133 2014-06-09 https://curation.pombase.org/pombe-embl-repo/trunk/?p=1782
I SPRPTA.3 repeat_region 15829..22113 2014-06-09 https://curation.pombase.org/pombe-embl-repo/trunk/?p=1782
I SPRPTA.4 repeat_region 20859..29663 2014-06-09 https://curation.pombase.org/pombe-embl-repo/trunk/?p=1782
I SPSNORNA.18 snoU24 snoRNA complement(5369640..5369686) 2024-06-26 https://curation.pombase.org/pombe-embl-repo/trunk/?p=9819
I SPSNORNA.29 sno52 snoRNA 339548..339642 2010-02-17 https://www.pombase.org/data/genome_sequence_and_features/artemis_files/OLD/20100129/
I SPSNORNA.42 intron complement(4937014..4937169) 2022-12-12 https://curation.pombase.org/pombe-embl-repo/trunk/?p=8587
I SPSNORNA.42 snR90 snoRNA complement(4937170..4937394) 2022-12-12 https://curation.pombase.org/pombe-embl-repo/trunk/?p=8587
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60 changes: 60 additions & 0 deletions results/all_qualifier_changes_file.tsv
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revision user date chromosome systematic_id primary_name feature_type qualifier_type added_or_removed value
9830 vw253 2024-06-29 I SPAC17A5.04c mde10 CDS controlled_curation removed term=sequence feature, transmembrane helices; cv=sequence_feature; db_xref=PMID:14871934; date=19700101
9830 vw253 2024-06-29 I SPAC3H1.14 gid4 CDS controlled_curation removed term=sequence feature, transmembrane helices; cv=sequence_feature; date=19700101
9830 vw253 2024-06-29 II SPBC15D4.04 alg7 CDS EC_number added 2.7.8.15
9830 vw253 2024-06-29 II SPBC15D4.04 gpt2 CDS EC_number removed 2.7.8.15
9830 vw253 2024-06-29 II SPBC15D4.04 alg7 CDS colour added 2
9830 vw253 2024-06-29 II SPBC15D4.04 gpt2 CDS colour removed 2
9830 vw253 2024-06-29 II SPBC15D4.04 alg7 CDS controlled_curation added term=complementation, functionally complemented by Chinese Hamster Ovary (CHO) L-G1PT; qualifier=full; db_xref=PMID:7893167; date=20120504
9830 vw253 2024-06-29 II SPBC15D4.04 alg7 CDS controlled_curation added term=complementation, functionally complemented by hamster Dpagt1; qualifier=full; db_xref=PMID:9455919; date=20140221
9830 vw253 2024-06-29 II SPBC15D4.04 alg7 CDS controlled_curation added term=gene expression, RNA level; annotation_extension=during(GO:0072690); qualifier=present; evidence=ECO:0005653; db_xref=PMID:7893167; date=20120504
9830 vw253 2024-06-29 II SPBC15D4.04 alg7 CDS controlled_curation added term=orthologous to S. cerevisiae YBR243C; date=19700101
9830 vw253 2024-06-29 II SPBC15D4.04 alg7 CDS controlled_curation added term=species distribution, conserved in eukaryotes only; date=20170210
9830 vw253 2024-06-29 II SPBC15D4.04 alg7 CDS controlled_curation added term=species distribution, conserved in eukaryotes; date=20081110
9830 vw253 2024-06-29 II SPBC15D4.04 alg7 CDS controlled_curation added term=species distribution, conserved in fungi; date=20081110
9830 vw253 2024-06-29 II SPBC15D4.04 alg7 CDS controlled_curation added term=species distribution, conserved in metazoa; date=20081110
9830 vw253 2024-06-29 II SPBC15D4.04 alg7 CDS controlled_curation added term=species distribution, conserved in vertebrates; date=20081110
9830 vw253 2024-06-29 II SPBC15D4.04 alg7 CDS controlled_curation added term=species distribution, predominantly single copy (one to one); date=20081110
9830 vw253 2024-06-29 II SPBC15D4.04 gpt2 CDS controlled_curation removed term=complementation, functionally complemented by Chinese Hamster Ovary (CHO) L-G1PT; qualifier=full; db_xref=PMID:7893167; date=20120504
9830 vw253 2024-06-29 II SPBC15D4.04 gpt2 CDS controlled_curation removed term=complementation, functionally complemented by hamster Dpagt1; qualifier=full; db_xref=PMID:9455919; date=20140221
9830 vw253 2024-06-29 II SPBC15D4.04 gpt2 CDS controlled_curation removed term=gene expression, RNA level; annotation_extension=during(GO:0072690); qualifier=present; evidence=ECO:0005653; db_xref=PMID:7893167; date=20120504
9830 vw253 2024-06-29 II SPBC15D4.04 gpt2 CDS controlled_curation removed term=orthologous to S. cerevisiae YBR243C; date=19700101
9830 vw253 2024-06-29 II SPBC15D4.04 gpt2 CDS controlled_curation removed term=species distribution, conserved in eukaryotes only; date=20170210
9830 vw253 2024-06-29 II SPBC15D4.04 gpt2 CDS controlled_curation removed term=species distribution, conserved in eukaryotes; date=20081110
9830 vw253 2024-06-29 II SPBC15D4.04 gpt2 CDS controlled_curation removed term=species distribution, conserved in fungi; date=20081110
9830 vw253 2024-06-29 II SPBC15D4.04 gpt2 CDS controlled_curation removed term=species distribution, conserved in metazoa; date=20081110
9830 vw253 2024-06-29 II SPBC15D4.04 gpt2 CDS controlled_curation removed term=species distribution, conserved in vertebrates; date=20081110
9830 vw253 2024-06-29 II SPBC15D4.04 gpt2 CDS controlled_curation removed term=species distribution, predominantly single copy (one to one); date=20081110
9830 vw253 2024-06-29 II SPBC15D4.04 alg7 CDS db_xref added SPD:32/32H04
9830 vw253 2024-06-29 II SPBC15D4.04 gpt2 CDS db_xref removed SPD:32/32H04
9830 vw253 2024-06-29 II SPBC15D4.04 alg7 CDS primary_name added alg7
9830 vw253 2024-06-29 II SPBC15D4.04 gpt2 CDS primary_name removed gpt2
9830 vw253 2024-06-29 II SPBC15D4.04 alg7 CDS product added UDP-N-acetylglucosamine--dolichyl-phosphate N-acetylglucosaminephosphotransferase, Alg7
9830 vw253 2024-06-29 II SPBC15D4.04 gpt2 CDS product removed UDP-N-acetylglucosamine--dolichyl-phosphate N-acetylglucosaminephosphotransferase
9830 vw253 2024-06-29 II SPBC15D4.04 alg7 CDS synonym added gpt
9830 vw253 2024-06-29 II SPBC15D4.04 alg7 CDS synonym added gpt2
9830 vw253 2024-06-29 II SPBC15D4.04 gpt2 CDS synonym removed alg7
9830 vw253 2024-06-29 II SPBC15D4.04 gpt2 CDS synonym removed gpt
9830 vw253 2024-06-29 II SPBC15D4.04 alg7 CDS systematic_id added SPBC15D4.04
9830 vw253 2024-06-29 II SPBC15D4.04 gpt2 CDS systematic_id removed SPBC15D4.04
9830 vw253 2024-06-29 II SPBC19C7.10 bqt4 CDS controlled_curation removed term=sequence feature, transmembrane helix; cv=sequence_feature; db_xref=PMID:19948484; date=20091127
9828 vw253 2024-06-28 I SPAC7D4.09c dfg10 CDS product added polyprenol reductase Dfg10
9828 vw253 2024-06-28 I SPAC7D4.09c dfg10 CDS product removed 3-oxo-5-alpha-steroid 4-dehydrogenase (predicted)
9826 vw253 2024-06-27 I SPAC1705.03c ecm33 CDS product added GPI anchored cell surface receptor L domain-like Ecm33
9826 vw253 2024-06-27 I SPAC1705.03c ecm33 CDS product removed extracellular leucine-rich repeat domain, receptor L domain-like Ecm33
9826 vw253 2024-06-27 I SPAPJ691.03 mic10 CDS colour added 2
9826 vw253 2024-06-27 I SPAPJ691.03 mic10 CDS colour removed 7
9826 vw253 2024-06-27 I SPAPJ691.03 mic10 CDS product added MICOS complex subunit Mic10
9826 vw253 2024-06-27 I SPAPJ691.03 mic10 CDS product removed MICOS complex subunit Mic10 (predicted)
9826 vw253 2024-06-27 II SPBC25H2.09 mic19 CDS colour added 2
9826 vw253 2024-06-27 II SPBC25H2.09 mic19 CDS colour removed 7
9826 vw253 2024-06-27 II SPBC3E7.05c mic60 CDS colour added 2
9826 vw253 2024-06-27 II SPBC3E7.05c mic60 CDS colour removed 7
9826 vw253 2024-06-27 II SPBC3E7.05c mic60 CDS product added MICOS complex subunit Mic60
9826 vw253 2024-06-27 II SPBC3E7.05c mic60 CDS product removed MICOS complex subunit Mic60 (predicted)
9826 vw253 2024-06-27 III SPCC1442.05c mic26 CDS colour added 2
9826 vw253 2024-06-27 III SPCC1442.05c mic26 CDS colour removed 7
9820 vw253 2024-06-26 I SPAC1F12.08 cab4 CDS product added dephospho-CoA kinase
9820 vw253 2024-06-26 I SPAC1F12.08 cab4 CDS product removed cytidylyltransferase (predicted)
9820 vw253 2024-06-26 I SPSNORNA.18 snoU24 snoRNA controlled_curation added term=warning, gene structure updated; date=20240626
9819 vw253 2024-06-26 III SPCC1223.12c meu10 CDS product added sporulation wall assembly GPI anchored protein, Meu10
9819 vw253 2024-06-26 III SPCC1223.12c meu10 CDS product removed cell surface protein involved in ascospore wall assembly, GPI anchored Meu10
9807 vw253 2024-06-19 I SPAC630.12 ted2 CDS colour added 7
9807 vw253 2024-06-19 I SPAC630.12 CDS colour removed 7
9807 vw253 2024-06-19 I SPAC630.12 ted2 CDS controlled_curation added term=orthologous to S. cerevisiae YDR182W; date=19700101
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2 changes: 1 addition & 1 deletion results/genome_changes_summary.tsv
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Expand Up @@ -8640,7 +8640,7 @@ SPSNORNA.14 I snoR54b snoRNA added 2004-09-15 2004-09-15 4239206..4239301
SPSNORNA.15 I snoR38 snoRNA added 2004-09-15 2004-09-15 5145032..5145105
SPSNORNA.16 I snoR56 snoRNA added 2004-09-15 2004-09-15 complement(5149373..5149454)
SPSNORNA.17 I snoR58 snoRNA added 2004-09-15 2004-09-15 complement(5367122..5367196)
SPSNORNA.18 I snoU24 snoRNA added 2004-09-15 2004-09-15 complement(5370539..5370585)
SPSNORNA.18 I snoU24 snoRNA added_and_changed 2004-09-15 2024-06-26 complement(5369613..5369691)
SPSNORNA.19 I snoR69 snoRNA added 2004-09-15 2004-09-15 5388458..5388540
SPSNORNA.20 I snoU17 snoRNA added 2004-09-15 2004-09-15 3395775..3396100
SPSNORNA.21 II snoU14 snoRNA added 2004-09-15 2004-09-15 1309534..1309645
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2 changes: 1 addition & 1 deletion results/genome_changes_summary_comments.tsv
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Expand Up @@ -8640,7 +8640,7 @@ SPSNORNA.14 I snoR54b snoRNA added 2004-09-15 2004-09-15 4239206..4239301
SPSNORNA.15 I snoR38 snoRNA added 2004-09-15 2004-09-15 5145032..5145105
SPSNORNA.16 I snoR56 snoRNA added 2004-09-15 2004-09-15 complement(5149373..5149454)
SPSNORNA.17 I snoR58 snoRNA added 2004-09-15 2004-09-15 complement(5367122..5367196)
SPSNORNA.18 I snoU24 snoRNA added 2004-09-15 2004-09-15 complement(5370539..5370585)
SPSNORNA.18 I snoU24 snoRNA added_and_changed 2004-09-15 2024-06-26 complement(5369613..5369691)
SPSNORNA.19 I snoR69 snoRNA added 2004-09-15 2004-09-15 5388458..5388540
SPSNORNA.20 I snoU17 snoRNA added 2004-09-15 2004-09-15 3395775..3396100
SPSNORNA.21 II snoU14 snoRNA added 2004-09-15 2004-09-15 1309534..1309645
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2 changes: 2 additions & 0 deletions results/only_modified_coordinates.tsv
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revision user date chromosome systematic_id primary_name feature_type added_or_removed value
9820 vw253 2024-06-26 I SPSNORNA.18 snoU24 snoRNA added complement(5369613..5369691)
9820 vw253 2024-06-26 I SPSNORNA.18 snoU24 snoRNA removed complement(5369640..5369686)
9264 vw253 2023-10-27 II SPNCRNA.105 lncRNA added 4071111..4071312
9264 vw253 2023-10-27 II SPNCRNA.105 ncRNA removed 4071111..4071312
9030 vw253 2023-07-11 II SPNCRNA.105 ncRNA added 4071111..4071312
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4 changes: 3 additions & 1 deletion results/only_modified_coordinates_comments.tsv
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revision user date chromosome systematic_id primary_name feature_type added_or_removed value db_xref pombase_reference pombase_comments
9820 vw253 2024-06-26 I SPSNORNA.18 snoU24 snoRNA added complement(5369613..5369691)
9820 vw253 2024-06-26 I SPSNORNA.18 snoU24 snoRNA removed complement(5369640..5369686)
9264 vw253 2023-10-27 II SPNCRNA.105 lncRNA added 4071111..4071312
9264 vw253 2023-10-27 II SPNCRNA.105 ncRNA removed 4071111..4071312
9030 vw253 2023-07-11 II SPNCRNA.105 ncRNA added 4071111..4071312
Expand Down Expand Up @@ -18926,8 +18928,8 @@ svn_2 kmr44 2011-08-22 III SPCTRNAVAL.12 tRNA removed complement(1065778..10658
20080716 - 2008-07-16 II SPBC2G2.09c crs1 CDS removed complement(join(3452584..3452769,3452822..3452877,3452918..3453077,3453119..3453406)) pers. comm. Charley Chahwan added new C-terminal exon, deleted exon 3452822..3452877, extended intron 2 by 4 nucleotides
20080716 - 2008-07-16 III SPCC338.08 ctp1 CDS added complement(join(1358891..1359082,1359127..1359819))
20080716 - 2008-07-16 III SPCC338.08 ctp1 CDS removed complement(join(1358891..1359082,1359121..1359819))
20080716 - 2008-07-16 III SPCC962.05 ast1 CDS added join(554521..554744,554865..556200) pers comm. M. O’Connell intron position moved
20080716 - 2008-07-16 III SPCC962.05 ast1 CDS added join(554521..554744,554865..556200) pers. comm. Matthew O’Connell
20080716 - 2008-07-16 III SPCC962.05 ast1 CDS added join(554521..554744,554865..556200) pers comm. M. O’Connell intron position moved
20080716 - 2008-07-16 III SPCC962.05 CDS removed join(554521..554722,554792..556200) pers comm. M. O’Connell intron position moved
20080716 - 2008-07-16 III SPCC962.05 CDS removed join(554521..554722,554792..556200) pers. comm. Matthew O’Connell
20080512 - 2008-05-12 I SPAC31G5.12c maf1 CDS added complement(join(3008184..3008795,3008914..3008957,3009044..3009089))
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4 changes: 3 additions & 1 deletion results/only_modified_coordinates_comments_no_type_change.tsv
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revision user date chromosome systematic_id primary_name feature_type added_or_removed value db_xref pombase_reference pombase_comments
9820 vw253 2024-06-26 I SPSNORNA.18 snoU24 snoRNA added complement(5369613..5369691)
9820 vw253 2024-06-26 I SPSNORNA.18 snoU24 snoRNA removed complement(5369640..5369686)
8920 vw253 2023-05-03 I SPAC1F8.07c pdc101 CDS added complement(join(101836..101872,101872..103544))
8920 vw253 2023-05-03 I SPAC1F8.07c pdc101 CDS removed complement(join(101836..101869,101872..103544))
8652 vw253 2023-01-13 II SPBC17D1.06 dbp3 CDS added 3338751..3340340
Expand Down Expand Up @@ -1384,8 +1386,8 @@ svn_2 kmr44 2011-08-22 III SPCTRNAVAL.12 tRNA removed complement(1065778..10658
20080716 - 2008-07-16 II SPBC2G2.09c crs1 CDS removed complement(join(3452584..3452769,3452822..3452877,3452918..3453077,3453119..3453406)) pers. comm. Charley Chahwan added new C-terminal exon, deleted exon 3452822..3452877, extended intron 2 by 4 nucleotides
20080716 - 2008-07-16 III SPCC338.08 ctp1 CDS added complement(join(1358891..1359082,1359127..1359819))
20080716 - 2008-07-16 III SPCC338.08 ctp1 CDS removed complement(join(1358891..1359082,1359121..1359819))
20080716 - 2008-07-16 III SPCC962.05 ast1 CDS added join(554521..554744,554865..556200) pers comm. M. O’Connell intron position moved
20080716 - 2008-07-16 III SPCC962.05 ast1 CDS added join(554521..554744,554865..556200) pers. comm. Matthew O’Connell
20080716 - 2008-07-16 III SPCC962.05 ast1 CDS added join(554521..554744,554865..556200) pers comm. M. O’Connell intron position moved
20080716 - 2008-07-16 III SPCC962.05 CDS removed join(554521..554722,554792..556200) pers comm. M. O’Connell intron position moved
20080716 - 2008-07-16 III SPCC962.05 CDS removed join(554521..554722,554792..556200) pers. comm. Matthew O’Connell
20080512 - 2008-05-12 I SPAC31G5.12c maf1 CDS added complement(join(3008184..3008795,3008914..3008957,3009044..3009089))
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2 changes: 2 additions & 0 deletions results/pombase_tables/gene-coordinate-change-data-RNA.tsv
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@@ -1,4 +1,6 @@
Date Systematic ID Primary name Before / After change Coordinates Comment Reference
2024-06-26 SPSNORNA.18 snoU24 after I:complement(5369613..5369691)
2024-06-26 SPSNORNA.18 snoU24 before I:complement(5369640..5369686)
2022-12-21 SPNCRNA.105 after II:4071111..4071312
2022-12-21 SPNCRNA.105 before II:4071111..4071304
2022-12-20 SPNCRNA.1597 after II:3391413..3393613
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2 changes: 1 addition & 1 deletion results/pombase_tables/gene-coordinate-change-data-protein-coding.tsv
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Expand Up @@ -1173,8 +1173,8 @@ Date Systematic ID Primary name Before / After change Coordinates Comment Refere
2008-07-16 SPBC2G2.09c crs1 before II:complement(join(3452584..3452769,3452822..3452877,3452918..3453077,3453119..3453406)) added new C-terminal exon, deleted exon 3452822..3452877, extended intron 2 by 4 nucleotides pers. comm. Charley Chahwan
2008-07-16 SPCC338.08 ctp1 after III:complement(join(1358891..1359082,1359127..1359819))
2008-07-16 SPCC338.08 ctp1 before III:complement(join(1358891..1359082,1359121..1359819))
2008-07-16 SPCC962.05 ast1 after III:join(554521..554744,554865..556200) intron position moved pers comm. M. O’Connell
2008-07-16 SPCC962.05 ast1 after III:join(554521..554744,554865..556200) pers. comm. Matthew O’Connell
2008-07-16 SPCC962.05 ast1 after III:join(554521..554744,554865..556200) intron position moved pers comm. M. O’Connell
2008-07-16 SPCC962.05 before III:join(554521..554722,554792..556200) intron position moved pers comm. M. O’Connell
2008-07-16 SPCC962.05 before III:join(554521..554722,554792..556200) pers. comm. Matthew O’Connell
2008-05-12 SPAC31G5.12c maf1 after I:complement(join(3008184..3008795,3008914..3008957,3009044..3009089))
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2 changes: 1 addition & 1 deletion results/pre_svn_coordinate_changes_file_comments.tsv
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Expand Up @@ -27464,8 +27464,8 @@ svn_2 kmr44 2011-08-22 III SPNCRNA.475 intron added 926625..926671
20080716 - 2008-07-16 III SPCC825.02 intron added 1027112..1027155
20080716 - 2008-07-16 III SPCC895.06 intron added 1010499..1010540
20080716 - 2008-07-16 III SPCC962.04 intron added 553566..553647
20080716 - 2008-07-16 III SPCC962.05 ast1 CDS added join(554521..554744,554865..556200) pers comm. M. O’Connell intron position moved
20080716 - 2008-07-16 III SPCC962.05 ast1 CDS added join(554521..554744,554865..556200) pers. comm. Matthew O’Connell
20080716 - 2008-07-16 III SPCC962.05 ast1 CDS added join(554521..554744,554865..556200) pers comm. M. O’Connell intron position moved
20080716 - 2008-07-16 III SPCC962.05 CDS removed join(554521..554722,554792..556200) pers comm. M. O’Connell intron position moved
20080716 - 2008-07-16 III SPCC962.05 CDS removed join(554521..554722,554792..556200) pers. comm. Matthew O’Connell
20080716 - 2008-07-16 III SPCC962.06c intron added complement(558129..558174)
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2 changes: 1 addition & 1 deletion results/pre_svn_coordinate_changes_file_comments_no_type_change.tsv
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Original file line number Diff line number Diff line change
Expand Up @@ -27438,8 +27438,8 @@ svn_2 kmr44 2011-08-22 III SPNCRNA.475 intron added 926625..926671
20080716 - 2008-07-16 III SPCC825.02 intron added 1027112..1027155
20080716 - 2008-07-16 III SPCC895.06 intron added 1010499..1010540
20080716 - 2008-07-16 III SPCC962.04 intron added 553566..553647
20080716 - 2008-07-16 III SPCC962.05 ast1 CDS added join(554521..554744,554865..556200) pers comm. M. O’Connell intron position moved
20080716 - 2008-07-16 III SPCC962.05 ast1 CDS added join(554521..554744,554865..556200) pers. comm. Matthew O’Connell
20080716 - 2008-07-16 III SPCC962.05 ast1 CDS added join(554521..554744,554865..556200) pers comm. M. O’Connell intron position moved
20080716 - 2008-07-16 III SPCC962.05 CDS removed join(554521..554722,554792..556200) pers comm. M. O’Connell intron position moved
20080716 - 2008-07-16 III SPCC962.05 CDS removed join(554521..554722,554792..556200) pers. comm. Matthew O’Connell
20080716 - 2008-07-16 III SPCC962.06c intron added complement(558129..558174)
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