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Add pyro.contrib.epidemiology experiment #13

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Add pyro.contrib.epidemiology experiment #13

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Commits on Jun 18, 2020

  1. Add first draft of epidemiology experiment

    @fritzo
    fritzo committed Jun 18, 2020
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  2. Enlarge experiment grid

    @fritzo
    fritzo committed Jun 18, 2020
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  3. Simplify rng seed

    @fritzo
    fritzo committed Jun 18, 2020
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  4. Fix bugs

    @fritzo
    fritzo committed Jun 18, 2020
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  5. Add more metadata, shrink grid

    @fritzo
    fritzo committed Jun 18, 2020
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  6. Allow --force to update metadata

    @fritzo
    fritzo committed Jun 18, 2020
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  7. Split mcmc versus svi

    @fritzo
    fritzo committed Jun 18, 2020
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  8. Fix typo

    @fritzo
    fritzo committed Jun 18, 2020
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  9. Fix typo

    @fritzo
    fritzo committed Jun 18, 2020
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  10. Reduce cost

    @fritzo
    fritzo committed Jun 18, 2020
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Commits on Jun 19, 2020

  1. Simplify

    @fritzo
    fritzo committed Jun 19, 2020
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  2. Add mcmc grid points

    @fritzo
    fritzo committed Jun 19, 2020
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  3. Add analysis notebook and long_uni_synth experiment

    @fritzo
    fritzo committed Jun 19, 2020
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  4. Add more grid points

    @fritzo
    fritzo committed Jun 19, 2020
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  5. Add more test points

    @fritzo
    fritzo committed Jun 19, 2020
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  6. Increase warmup_steps, speed up cache check

    @fritzo
    fritzo committed Jun 19, 2020
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  7. Refactor

    @fritzo
    fritzo committed Jun 19, 2020
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  8. Refactor to create an Experiment class

    @fritzo
    fritzo committed Jun 19, 2020
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Commits on Jun 20, 2020

  1. Add first draft of real data experiment

    @fritzo
    fritzo committed Jun 20, 2020
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Commits on Jun 21, 2020

  1. Expose more SVI parameters

    @fritzo
    fritzo committed Jun 21, 2020
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  2. Add zero inflation and more plots

    @fritzo
    fritzo committed Jun 21, 2020
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Commits on Jun 22, 2020

  1. Add intervention date

    @fritzo
    fritzo committed Jun 22, 2020
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Commits on Jun 24, 2020

  1. Add more counties; convolve input

    @fritzo
    fritzo committed Jun 24, 2020
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  2. Combine od1=od2=od

    @fritzo
    fritzo committed Jun 24, 2020
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  3. Allow heterogeneous response rate

    @fritzo
    fritzo committed Jun 24, 2020
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  4. Support synthetic data in uni_real.py

    @fritzo
    fritzo committed Jun 24, 2020
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