fixed paths in response figure notebook, updated versions in requirem…

…ents.txt
quinlan-lab · Jul 9, 2019 · 5856df7 · 5856df7
1 parent f922ffb
commit 5856df7
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Showing 2 changed files with 5 additions and 5 deletions.
diff --git a/binder/requirements.txt b/binder/requirements.txt
@@ -1,6 +1,6 @@
-scipy==1.1.0
+scipy==1.2.1
 seaborn==0.9.0
 matplotlib==2.2.3
-numpy==1.14.3
-pandas==0.23.0
+numpy==1.16.2
+pandas==0.24.2
 statsmodels==0.9.0
diff --git a/notebooks/response_figures.ipynb b/notebooks/response_figures.ipynb
@@ -79,7 +79,7 @@
     "set.seed(12345)\n",
     "\n",
     "# read in third-generation DNMs\n",
-    "gen3 = read.csv(\"../../dnm-analysis/ceph/manuscript/third_gen.dnms.summary.csv\")\n",
+    "gen3 = read.csv(\"../data/third_gen.dnms.summary.csv\")\n",
     "\n",
     "# number of subsampling experiments to perform\n",
     "n_sims = 100\n",
@@ -314,7 +314,7 @@
     "library(cowplot)\n",
     "\n",
     "# read in third-generation DNMs\n",
-    "gen3 = read.csv(\"../../dnm-analysis/ceph/manuscript/third_gen.dnms.summary.csv\")\n",
+    "gen3 = read.csv(\"../data/third_gen.dnms.summary.csv\")\n",
     "\n",
     "orig_df = data.frame()\n",
     "\n",