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PopIII Simulation #368

Merged
merged 212 commits into from
Feb 5, 2024
Merged

PopIII Simulation #368

merged 212 commits into from
Feb 5, 2024

Commits on Aug 29, 2023

  1. added PopIII setup

    Piyush Sharda authored and Piyush Sharda committed Aug 29, 2023
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Commits on Aug 30, 2023

  1. added rotation

    Piyush Sharda authored and Piyush Sharda committed Aug 30, 2023
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Commits on Sep 1, 2023

  1. added minimum density below which chemistry should not be performed

    Piyush Sharda authored and Piyush Sharda committed Sep 1, 2023
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  2. final touches

    Piyush Sharda authored and Piyush Sharda committed Sep 1, 2023
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  4. update with popiii

    Piyush Sharda authored and Piyush Sharda committed Sep 1, 2023
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  5. updated

    Piyush Sharda authored and Piyush Sharda committed Sep 1, 2023
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  6. bug fix

    psharda committed Sep 1, 2023
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  7. decrease timesteps

    psharda committed Sep 1, 2023
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  8. use numdens

    Piyush Sharda authored and Piyush Sharda committed Sep 1, 2023
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  9. verbose

    Piyush Sharda authored and Piyush Sharda committed Sep 1, 2023
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  10. fix bug

    psharda committed Sep 1, 2023
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  12. define proper values

    psharda committed Sep 1, 2023
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  13. fix bug

    psharda committed Sep 1, 2023
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  14. try

    Piyush Sharda authored and Piyush Sharda committed Sep 1, 2023
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  15. fixed bug

    psharda committed Sep 1, 2023
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Commits on Sep 2, 2023

  1. try2

    psharda committed Sep 2, 2023
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  2. reset density floor

    psharda committed Sep 2, 2023
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Commits on Sep 8, 2023

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  3. use BL_Profile

    psharda committed Sep 8, 2023
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  6. updated cmakelists

    psharda committed Sep 8, 2023
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  7. correct includes order

    Co-authored-by: github-actions[bot] <41898282+github-actions[bot]@users.noreply.github.com>
    psharda and github-actions[bot] authored Sep 8, 2023
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  9. added author name

    psharda committed Sep 8, 2023
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  10. remove duplicate include

    psharda committed Sep 8, 2023
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  11. include NSCBC

    psharda committed Sep 8, 2023
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  12. added comments

    psharda committed Sep 8, 2023
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  13. set reconstruct_eint to true

    psharda committed Sep 8, 2023
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  14. move perturbations to src/

    psharda committed Sep 8, 2023
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  15. moved perturbatinos to src/

    psharda committed Sep 8, 2023
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  16. move perturb to src

    psharda committed Sep 8, 2023
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  17. moved perturb to src

    psharda committed Sep 8, 2023
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  18. fix bug

    psharda committed Sep 8, 2023
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  19. re-add enabled

    psharda committed Sep 8, 2023
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  21. remove turbdatareader

    psharda committed Sep 8, 2023
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  22. remove turbdatareader

    psharda committed Sep 8, 2023
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  23. move turbdatareader to src

    psharda committed Sep 8, 2023
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Commits on Sep 9, 2023

  1. dont refine outside core

    psharda committed Sep 9, 2023
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  3. remove is chem enabled

    psharda committed Sep 9, 2023
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  5. define redshift

    psharda committed Sep 9, 2023
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  6. reset params

    psharda committed Sep 9, 2023
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Commits on Sep 11, 2023

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Commits on Sep 12, 2023

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Commits on Sep 13, 2023

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  2. modify

    psharda committed Sep 13, 2023
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  3. increase density floor

    Piyush Sharda committed Sep 13, 2023
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  4. return invalid state if mass scalars have negative partial densities

    Piyush Sharda authored and Piyush Sharda committed Sep 13, 2023
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  5. enforce limits on mass scalars

    Piyush Sharda authored and Piyush Sharda committed Sep 13, 2023
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  6. add LLF fallback solver

    BenWibking committed Sep 13, 2023
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  7. use if constexpr

    Piyush Sharda authored and Piyush Sharda committed Sep 13, 2023
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  10. fix typo

    BenWibking committed Sep 13, 2023
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Commits on Sep 14, 2023

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  2. set temp floor based on redshift

    Piyush Sharda committed Sep 14, 2023
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  4. print cell coords

    Piyush Sharda authored and Piyush Sharda committed Sep 14, 2023
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  5. print cell coords

    Piyush Sharda authored and Piyush Sharda committed Sep 14, 2023
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  6. check for dimensions

    Piyush Sharda authored and Piyush Sharda committed Sep 14, 2023
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  7. amrex spelling

    Piyush Sharda authored and Piyush Sharda committed Sep 14, 2023
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Commits on Sep 15, 2023

  1. new function for printing coords

    Piyush Sharda authored and Piyush Sharda committed Sep 15, 2023
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  2. fix error

    Piyush Sharda authored and Piyush Sharda committed Sep 15, 2023
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  3. declare const

    Piyush Sharda authored and Piyush Sharda committed Sep 15, 2023
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  4. fix bug

    Piyush Sharda authored and Piyush Sharda committed Sep 15, 2023
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  6. remove clangtidy suggestion

    Piyush Sharda authored and Piyush Sharda committed Sep 15, 2023
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  7. drive turb in entire box

    Piyush Sharda committed Sep 15, 2023
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  11. call MPI_Abort

    BenWibking committed Sep 15, 2023
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  13. Merge remote-tracking branch 'ben/BenWibking/output-multifab-on-crash…

    …' into popiii
    Piyush Sharda committed Sep 15, 2023
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Commits on Sep 18, 2023

  1. debuggin

    Piyush Sharda committed Sep 18, 2023
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  2. debugging

    Piyush Sharda committed Sep 18, 2023
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Commits on Sep 19, 2023

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  2. dont do chem if dt < 0

    Piyush Sharda committed Sep 19, 2023
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  3. use speed ceiling

    Piyush Sharda committed Sep 19, 2023
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Commits on Sep 20, 2023

  1. ensure pressure eqbm in ICs

    Piyush Sharda committed Sep 20, 2023
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  2. checks

    Piyush Sharda committed Sep 20, 2023
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  4. add velx and pressure as derived vars

    Piyush Sharda committed Sep 20, 2023
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  5. add exmaple of refinement restricted to certain cell positions to avo…

    …id refinement at cloud edge
    Piyush Sharda committed Sep 20, 2023
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  6. abort if rho = 0;

    Piyush Sharda committed Sep 20, 2023
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  7. check hydro state in more locations

    Piyush Sharda committed Sep 20, 2023
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  8. fix tab

    Piyush Sharda committed Sep 20, 2023
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  9. reduce validstates boolean

    Piyush Sharda authored and Piyush Sharda committed Sep 20, 2023
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  10. add function call name keyword

    Piyush Sharda committed Sep 20, 2023
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Commits on Sep 21, 2023

  1. enforceLimits returns a bool

    Piyush Sharda committed Sep 21, 2023
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  2. enforceLimits returns a bool

    Piyush Sharda committed Sep 21, 2023
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  3. write pltfile when rho = 0 encountered and abort

    Piyush Sharda committed Sep 21, 2023
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  4. indent

    Piyush Sharda authored and Piyush Sharda committed Sep 21, 2023
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  5. added dummy test

    Piyush Sharda committed Sep 21, 2023
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  6. fix bug

    Piyush Sharda committed Sep 21, 2023
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  7. updated

    Piyush Sharda committed Sep 21, 2023
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  8. reset refinement

    Piyush Sharda committed Sep 21, 2023
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  9. added sound speed

    Piyush Sharda authored and Piyush Sharda committed Sep 21, 2023
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  10. added sound speed

    Piyush Sharda committed Sep 21, 2023
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Commits on Sep 22, 2023

  1. do not abort

    psharda committed Sep 22, 2023
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Commits on Sep 23, 2023

  1. refine on 64 cells

    psharda committed Sep 23, 2023
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Commits on Sep 24, 2023

  1. update amrex

    psharda committed Sep 24, 2023
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  3. delete copiii

    psharda committed Sep 24, 2023
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  4. remove debugs

    psharda committed Sep 24, 2023
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  5. remove debugs

    psharda committed Sep 24, 2023
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  6. remove debugs

    psharda committed Sep 24, 2023
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  7. updated

    psharda committed Sep 24, 2023
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Commits on Sep 25, 2023

  1. remove speed ceiling

    psharda committed Sep 25, 2023
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  2. renormalize species post flooring

    Piyush Sharda authored and Piyush Sharda committed Sep 25, 2023
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  4. resolve spell check

    psharda committed Sep 25, 2023
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Commits on Sep 26, 2023

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  3. undo some stuff

    psharda committed Sep 26, 2023
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  4. remove debug printf

    psharda committed Sep 26, 2023
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  5. remove debug printf

    psharda committed Sep 26, 2023
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  6. remove debug printf

    psharda committed Sep 26, 2023
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  7. remove debug printf

    psharda committed Sep 26, 2023
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Commits on Sep 27, 2023

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  2. revert enforceLimits boolean

    psharda committed Sep 27, 2023
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  3. fix spaces

    psharda committed Sep 27, 2023
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  5. renormalize mass scalars post enforcing limit

    Piyush Sharda authored and Piyush Sharda committed Sep 27, 2023
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Commits on Oct 6, 2023

  1. only normalize if sum > 0

    Piyush Sharda authored and Piyush Sharda committed Oct 6, 2023
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  3. updated

    psharda committed Oct 6, 2023
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  5. update

    psharda committed Oct 6, 2023
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  6. merged spsum

    psharda committed Oct 6, 2023
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  8. cosmetic

    psharda committed Oct 6, 2023
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Commits on Oct 7, 2023

  1. remove actual_eos_data.H

    psharda committed Oct 7, 2023
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  2. resolve clang tidy comments

    psharda committed Oct 7, 2023
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Commits on Oct 9, 2023

  1. updated microp

    Piyush Sharda authored and Piyush Sharda committed Oct 9, 2023
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Commits on Oct 14, 2023

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Commits on Oct 15, 2023

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Commits on Nov 4, 2023

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  2. fix bug

    psharda committed Nov 4, 2023
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Commits on Nov 9, 2023

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Commits on Nov 28, 2023

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Commits on Dec 20, 2023

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  2. updated microp

    psharda committed Dec 20, 2023
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Commits on Dec 26, 2023

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Commits on Jan 11, 2024

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Commits on Jan 25, 2024

  1. updated

    psharda committed Jan 25, 2024
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  2. fix bug

    psharda committed Jan 25, 2024
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  3. fix bug

    psharda committed Jan 25, 2024
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Commits on Feb 3, 2024

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  2. dummy commit

    Piyush Sharda authored and Piyush Sharda committed Feb 3, 2024
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  3. Merge remote-tracking branch 'origin/test' into popiii

    Piyush Sharda authored and Piyush Sharda committed Feb 3, 2024
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  4. debug 1

    Piyush Sharda authored and Piyush Sharda committed Feb 3, 2024
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  5. debug 1

    Piyush Sharda authored and Piyush Sharda committed Feb 3, 2024
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  6. include other headers present in primordial chem

    Piyush Sharda authored and Piyush Sharda committed Feb 3, 2024
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  7. include openPMRsources as in primordial chem

    Piyush Sharda authored and Piyush Sharda committed Feb 3, 2024
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  9. test radhydrosim

    Piyush Sharda authored and Piyush Sharda committed Feb 3, 2024
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  11. debug chemistry

    Piyush Sharda authored and Piyush Sharda committed Feb 3, 2024
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  13. const tiny profiler

    Piyush Sharda authored and Piyush Sharda committed Feb 3, 2024
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  14. moved turb files to src

    Piyush Sharda authored and Piyush Sharda committed Feb 3, 2024
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  15. updated cmakelists

    Piyush Sharda authored and Piyush Sharda committed Feb 3, 2024
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  16. comment print statement

    Piyush Sharda authored and Piyush Sharda committed Feb 3, 2024
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  17. codeQL suggestion

    Piyush Sharda authored and Piyush Sharda committed Feb 3, 2024
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Commits on Feb 4, 2024

  1. moved turbdatareader

    Piyush Sharda authored and Piyush Sharda committed Feb 4, 2024
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  2. clang-tidy warnings

    Piyush Sharda authored and Piyush Sharda committed Feb 4, 2024
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  4. resolve conflict

    Piyush Sharda authored and Piyush Sharda committed Feb 4, 2024
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  5. revert

    Piyush Sharda authored and Piyush Sharda committed Feb 4, 2024
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  6. reorder includes

    Piyush Sharda authored and Piyush Sharda committed Feb 4, 2024
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  8. debug

    Piyush Sharda authored and Piyush Sharda committed Feb 4, 2024
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  10. turn off pre-commit

    Piyush Sharda authored and Piyush Sharda committed Feb 4, 2024
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  12. remove precommit

    Piyush Sharda authored and Piyush Sharda committed Feb 4, 2024
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  13. Merge branch 'popiii' of https://github.com/psharda/quokka into popiii

    Piyush Sharda authored and Piyush Sharda committed Feb 4, 2024
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  14. debug

    Piyush Sharda authored and Piyush Sharda committed Feb 4, 2024
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  15. dont build primordial chem

    Piyush Sharda authored and Piyush Sharda committed Feb 4, 2024
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  17. revert

    Piyush Sharda authored and Piyush Sharda committed Feb 4, 2024
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  18. cmake in 3D

    Piyush Sharda authored and Piyush Sharda committed Feb 4, 2024
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  19. fix clang-tidy warnings

    Piyush Sharda authored and Piyush Sharda committed Feb 4, 2024
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  20. readded precommit

    Piyush Sharda authored and Piyush Sharda committed Feb 4, 2024
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  21. trying to fix table3d error

    Piyush Sharda authored and Piyush Sharda committed Feb 4, 2024
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  23. revert

    Piyush Sharda authored and Piyush Sharda committed Feb 4, 2024
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Commits on Feb 5, 2024

  1. arrange tests alphabetically

    Piyush Sharda authored and Piyush Sharda committed Feb 5, 2024
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  2. reduce grid size to 128

    Piyush Sharda authored and Piyush Sharda committed Feb 5, 2024
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  3. comment for h5py

    Piyush Sharda authored and Piyush Sharda committed Feb 5, 2024
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  4. make initial rms vel a runtime param

    Piyush Sharda authored and Piyush Sharda committed Feb 5, 2024
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  5. let the code calculate pressure

    Piyush Sharda authored and Piyush Sharda committed Feb 5, 2024
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  6. make jeans refinement params runtime params

    Piyush Sharda authored and Piyush Sharda committed Feb 5, 2024
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  7. move dt < 0 outside of the inner loop

    Piyush Sharda authored and Piyush Sharda committed Feb 5, 2024
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  8. declaring an initial value of vars

    Piyush Sharda authored and Piyush Sharda committed Feb 5, 2024
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  9. make density floor runtime param

    Piyush Sharda authored and Piyush Sharda committed Feb 5, 2024
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  11. use a different variable for parmparse

    Piyush Sharda authored and Piyush Sharda committed Feb 5, 2024
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  12. dont need to define density_floor, its defined in simulation.hpp

    Piyush Sharda authored and Piyush Sharda committed Feb 5, 2024
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